Chain A from PDB Type:DNA Length:18
1qar A 1 ATTTAAGACTTCTTAATT 18
10
Chain B from PDB Type:DNA Length:18
1qar B 1 AATTAAGAAGTCTTAAAT 18
10
Chain C from PDB Type:PROTEIN Length:216
aligned with RPC2_BPP21 | P69203 from UniProtKB/Swiss-Prot Length:5
Alignment length:216
5
| - - - - - - - - - - - - - - - - - - - - -
RPC2_BPP21 1 MNTQL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhh..hhhhhhh..............hhhhh..........hhhhhh.....hhhhhhhh.............................................ee............eee.....eee..........ee.................... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qar C 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP 216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain C from PDB Type:PROTEIN Length:216
aligned with RPC2_BPP22 | P69202 from UniProtKB/Swiss-Prot Length:216
Alignment length:216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
RPC2_BPP22 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP 216
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhh..hhhhhhh..............hhhhh..........hhhhhh.....hhhhhhhh.............................................ee............eee.....eee..........ee.................... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------HTH_CROC1 PDB: C:10-64 UniProt: 10-64 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qar C 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP 216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain D from PDB Type:PROTEIN Length:216
aligned with RPC2_BPP21 | P69203 from UniProtKB/Swiss-Prot Length:5
Alignment length:216
5
| - - - - - - - - - - - - - - - - - - - - -
RPC2_BPP21 1 MNTQL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhh..hhhhhhh.............................hhhhhh.....hhhhhhhh.............................................ee............eee.....eee..........ee.................... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qar D 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP 216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain D from PDB Type:PROTEIN Length:216
aligned with RPC2_BPP22 | P69202 from UniProtKB/Swiss-Prot Length:216
Alignment length:216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
RPC2_BPP22 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP 216
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhh..hhhhhhh.............................hhhhhh.....hhhhhhhh.............................................ee............eee.....eee..........ee.................... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------HTH_CROC1 PDB: D:10-64 UniProt: 10-64 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qar D 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP 216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |