Chain 1 from PDB Type:DNA Length:20
1lmb 1 1 AATACCACTGGCGGTGATAT 20
10 20
Chain 2 from PDB Type:DNA Length:20
1lmb 2 21 TATATCACCGCCAGTGGTAT 40
30 40
Chain 3 from PDB Type:PROTEIN Length:87
aligned with RPC1_LAMBD | P03034 from UniProtKB/Swiss-Prot Length:237
Alignment length:87
16 26 36 46 56 66 76 86
RPC1_LAMBD 7 PLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVS 93
SCOP domains d1lmb3_ 3: lambda C1 repressor, DNA-binding domain SCOP domains
CATH domains 1lmb300 3:6-92 lambda repressor-like DNA-binding domains CATH domains
Pfam domains --------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhh.........hhhhhhh....hhhhhhhh.........hhhhhhhhh.........hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------HTH_CROC1 PDB: 3:18-76 UniProt: 19-77 ---------------- PROSITE
Transcript --------------------------------------------------------------------------------------- Transcript
1lmb 3 6 PLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVS 92
15 25 35 45 55 65 75 85
Chain 4 from PDB Type:PROTEIN Length:92
aligned with RPC1_LAMBD | P03034 from UniProtKB/Swiss-Prot Length:237
Alignment length:92
11 21 31 41 51 61 71 81 91
RPC1_LAMBD 2 STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVS 93
SCOP domains d1lmb4_ 4: lambda C1 repressor, DNA-binding domain SCOP domains
CATH domains 1lmb400 4:1-92 lambda repressor-like DNA-binding domains CATH domains
Pfam domains (1) --------------------HTH_3-1lmb401 4:21-76 ---------------- Pfam domains (1)
Pfam domains (2) --------------------HTH_3-1lmb402 4:21-76 ---------------- Pfam domains (2)
Sec.struct. author ........hhhhhhhhhhhhhhh.........hhhhhhh....hhhhhhhh.........hhhhhhhhh.........hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------HTH_CROC1 PDB: 4:18-76 UniProt: 19-77 ---------------- PROSITE
Transcript -------------------------------------------------------------------------------------------- Transcript
1lmb 4 1 STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVS 92
10 20 30 40 50 60 70 80 90
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |