No.	Name	Count	Type	Full Name
1	FES	2	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
2	HEM	7	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
3	M3L	1	Mod. Amino Acid	N-TRIMETHYLLYSINE
4	SMA	2	Ligand/Ion	STIGMATELLIN A

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLN C:43 , GLY C:47 , ILE C:48 , MET C:50 , ALA C:51 , ARG C:79 , HIS C:82 , ALA C:83 , THR C:127 , ALA C:128 , GLY C:131 , TYR C:132 , VAL C:135 , HIS C:183 , TYR C:184 , PRO C:187	BINDING SITE FOR RESIDUE HEM C 501
02	AC2	SOFTWARE	TRP C:30 , GLY C:33 , HIS C:96 , MET C:97 , LYS C:99 , SER C:105 , LEU C:113 , GLY C:117 , VAL C:118 , ILE C:120 , HIS C:197 , LEU C:201 , SER C:206 , SER C:207	BINDING SITE FOR RESIDUE HEM C 502
03	AC3	SOFTWARE	VAL D:100 , CYS D:101 , CYS D:104 , HIS D:105 , ASN D:169 , ILE D:180 , ARG D:184 , TYR D:190 , PHE D:218 , ALA D:224 , MET D:225 , VAL D:228	BINDING SITE FOR RESIDUE HEM D 503
04	AC4	SOFTWARE	CYS E:159 , HIS E:161 , LEU E:162 , CYS E:178 , HIS E:181 , SER E:183	BINDING SITE FOR RESIDUE FES E 504
05	AC5	SOFTWARE	ILE C:125 , ALA C:126 , GLY C:143 , VAL C:146 , ILE C:147 , LEU C:165 , VAL C:270 , PRO C:271 , GLU C:272 , PHE C:278 , TYR C:279 , MET C:295 , HIS P:181	BINDING SITE FOR RESIDUE SMA C 505
06	AC6	SOFTWARE	GLN N:43 , GLY N:47 , ILE N:48 , MET N:50 , ARG N:79 , HIS N:82 , ALA N:83 , PHE N:89 , ALA N:128 , GLY N:131 , TYR N:132 , VAL N:135 , HIS N:183 , TYR N:184 , PRO N:187	BINDING SITE FOR RESIDUE HEM N 521
07	AC7	SOFTWARE	TRP N:30 , GLY N:33 , LEU N:36 , HIS N:96 , LYS N:99 , SER N:105 , LEU N:113 , TRP N:114 , GLY N:117 , VAL N:194 , HIS N:197 , LEU N:201 , SER N:206 , SER N:207	BINDING SITE FOR RESIDUE HEM N 522
08	AC8	SOFTWARE	VAL O:100 , CYS O:101 , CYS O:104 , HIS O:105 , ASN O:169 , PRO O:175 , ARG O:184 , TYR O:190 , ILE O:191 , PHE O:218 , ALA O:224 , MET O:225	BINDING SITE FOR RESIDUE HEM O 523
09	AC9	SOFTWARE	CYS P:159 , HIS P:161 , LEU P:162 , CYS P:178 , CYS P:180 , HIS P:181 , SER P:183	BINDING SITE FOR RESIDUE FES P 524
10	BC1	SOFTWARE	HIS E:181 , THR N:122 , ILE N:125 , ALA N:126 , PHE N:129 , LEU N:130 , MET N:139 , VAL N:146 , ILE N:147 , ILE N:269 , PRO N:271 , GLU N:272 , TYR N:279 , MET N:295 , PHE N:296	BINDING SITE FOR RESIDUE SMA N 525
11	BC2	SOFTWARE	ARG W:18 , CYS W:19 , CYS W:22 , HIS W:23 , VAL W:33 , GLY W:34 , ILE W:40 , SER W:45 , GLY W:46 , TYR W:51 , TYR W:53 , THR W:54 , ASN W:57 , TRP W:64 , TYR W:72 , THR W:83 , LYS W:84 , MET W:85 , PHE W:87	BINDING SITE FOR RESIDUE HEM W 526

No.	Residues
1	E:164	-	E:180
2	F:101	-	F:123
3	J:22	-	J:96
4	K:23	-	K:88
5	P:164	-	P:180
6	Q:101	-	Q:123
7	U:22	-	U:96
8	V:23	-	V:88

No.	Residues
1	Thr K:7	-	Pro K:8
2	Glu K:79	-	Pro K:80
3	Phe K:94	-	Pro K:95
4	Thr V:7	-	Pro V:8
5	Glu V:79	-	Pro V:80
6	Phe V:94	-	Pro V:95

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_CYB_YEAST_001 *	G	131	S	CYB_YEAST	---	---	C/N	G	131	S
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CYTB_NTER	PS51002	Cytochrome b/b6 N-terminal region profile.	CYB_YEAST	1-210	2	C:1-210 N:1-210
2	CYTC	PS51007	Cytochrome c family profile.	CYC1_YEAST	7-108	1	W:6-107
				CY1_YEAST	88-241	2	D:88-241 O:88-241
3	INSULINASE	PS00143	Insulinase family, zinc-binding region signature.	QCR2_YEAST	37-59	2	B:37-59 M:37-59
4	RIESKE	PS51296	Rieske [2Fe-2S] iron-sulfur domain profile.	UCRI_YEAST	123-214	2	E:123-214 P:123-214
5	CYTB_CTER	PS51003	Cytochrome b/b6 C-terminal region profile.	CYB_YEAST	211-381	2	C:211-381 N:211-381

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	Q0105	1	Q0105.1	Mito:36540-36954	415	CYB_YEAST	1-139	139	2	C:1-139 N:1-139	139 139
1.2	Q0105	2	Q0105.2	Mito:37723-37736	14	CYB_YEAST	139-143	5	2	C:139-143 N:139-143	5 5
1.3	Q0105	3	Q0105.3	Mito:39141-39217	77	CYB_YEAST	144-169	26	2	C:144-169 N:144-169	26 26
1.4	Q0105	4	Q0105.4	Mito:40841-41090	250	CYB_YEAST	169-252	84	2	C:169-252 N:169-252	84 84
1.5	Q0105	5	Q0105.5	Mito:42508-42558	51	CYB_YEAST	253-269	17	2	C:253-269 N:253-269	17 17
1.6	Q0105	6	Q0105.6	Mito:43297-43647	351	CYB_YEAST	270-385	116	2	C:270-385 N:270-385	116 116
2.1	YBL045C	1	YBL045C.1	II:135519-134146	1374	QCR1_YEAST	1-457	457	2	A:27-456 (gaps) L:27-456 (gaps)	431 431
3.1	YDR529C	1	YDR529C.1	IV:1496541-1496158	384	QCR7_YEAST	1-127	127	2	G:3-127 R:3-127	125 125
4.1	YEL024W	1	YEL024W.1	V:107260-107907	648	UCRI_YEAST	1-215	215	2	E:31-215 P:31-215	185 185
5.1	YFR033C	1	YFR033C.1	VI:224757-224314	444	QCR6_YEAST	1-147	147	2	F:74-147 (gaps) Q:74-147 (gaps)	81 81
6.1	YGR183C	1	YGR183C.1	VII:859481-859479	3	QCR9_YEAST	1-1	1	0	-	-
6.2	YGR183C	2	YGR183C.2	VII:859265-859068	198	QCR9_YEAST	2-66	65	2	I:4-56 T:4-56	53 53
7.1	YJL166W	1	YJL166W.1	X:106428-106712	285	QCR8_YEAST	1-94	94	2	H:2-94 S:2-94	93 93
8.1	YJR048W	1	YJR048W.1	X:526327-526656	330	CYC1_YEAST	1-109	109	1	W:1-108	108
9.1	YOR065W	1	YOR065W.1	XV:447441-448370	930	CY1_YEAST	1-309	309	2	D:62-306 O:62-306	245 245
10.1	YPR191W	1	YPR191W.1	XVI:919377-920483	1107	QCR2_YEAST	1-368	368	2	B:17-368 M:17-368	352 352

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:430
 aligned with QCR1_YEAST | P07256 from UniProtKB/Swiss-Prot  Length:457

    Alignment length:431
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456 
           QCR1_YEAST    27 AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 457
               SCOP domains d1kyoa1 A:27-239 C ytochrome bc1 core subunit 1                                                                                                                                                                       d1kyoa2 A:240-456 Cytochrome bc1 core subunit 1                                                                                                                                                                           SCOP domains
               CATH domains 1kyoA01 A:27-227 C ytochrome Bc1 Complex; Chain A, domain 1                                                                                                                                               ------1kyoA02 A:234-456 Cytochrome Bc1 Complex; Chain A, domain 1                                                                                                                                                                     CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee...eeeeee..-...eeeeeee..hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.eeeeee....eeeeeee...hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh....hhhhhhhhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhhh....................eeeeee......eeeeeeee.......hhhhhhhhhhhhheee..hhhhhh...hhhhhhhh.....eeeeeeee....eeeeeeeee....hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....hhhhhhhhhhh.hhhhhhhhhhhhh.....eeeeee......hhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 2 Exon 2.1  PDB: A:27-456 (gaps) UniProt: 1-457 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                      Transcript 2
                 1kyo A  27 AEVTQLSNGIVVATEHNP-AHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEDNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 456
                                    36       |45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455 
                                            44 |                                                                                                                                                                                                                                                                                                                                                                                                                           
                                              45                                                                                                                                                                                                                                                                                                                                                                                                                           

Chain B from PDB  Type:PROTEIN  Length:352
 aligned with QCR2_YEAST | P07257 from UniProtKB/Swiss-Prot  Length:368

    Alignment length:352
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  
           QCR2_YEAST    17 LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL 368
               SCOP domains d1kyob1 B:17-218 Cytochrome bc1 core subunit 2                                                                                                                                                            d1kyob2 B:219-368 Cytochrome bc1 core subunit 2                                                                                                        SCOP domains
               CATH domains 1kyoB01 B:17-227 Cytochrome Bc1 Complex; Chain A, domain 1                                                                                                                                                         ------1kyoB02 B:234-368 Cytochrome Bc1 Complex; Chain A, domain 1                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee........eeeeeee..........hhhhhhhhhh.......hhhhhhhhhhhhh...eeee....eeeeeeehhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhh.........................eeeee.....eeeeeeee...hhhhhhhhhhhh............eeeeee....eeeeeeee..hhhhhhhhhhhhhhhhhh............hhhhhh.......................eeeeeehhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------INSULINASE  PDB: B:37-5--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
              Transcript 10 Exon 10.1  PDB: B:17-368 UniProt: 1-368 [INCOMPLETE]                                                                                                                                                                                                                                                                                                             Transcript 10
                 1kyo B  17 LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL 368
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  

Chain C from PDB  Type:PROTEIN  Length:385
 aligned with CYB_YEAST | P00163 from UniProtKB/Swiss-Prot  Length:385

    Alignment length:385
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380     
            CYB_YEAST     1 MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK 385
               SCOP domains d1kyoc3 C:1-261 Mitochondrial cytochrome b subunit, N-terminal domain                                                                                                                                                                                                d1kyoc2 C:262-385 Mitochondrial cytochrome b subunit, C-terminal domain                                                      SCOP domains
               CATH domains 1kyoC00 C:1-385 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eee...hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh.............hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE CYTB_NTER  PDB: C:1-210 UniProt: 1-210                                                                                                                                                                            CYTB_CTER  PDB: C:211-381 UniProt: 211-381                                                                                                                                 ---- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: C:1-139 UniProt: 1-139                                                                                                      ----Exon 1.3  PDB: C:144-169  -----------------------------------------------------------------------------------Exon 1.5         Exon 1.6  PDB: C:270-385 UniProt: 270-385                                                                            Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------1.2  -------------------------Exon 1.4  PDB: C:169-252 UniProt: 169-252                                           ------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1kyo C   1 MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFTLTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK 385
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380     

Chain D from PDB  Type:PROTEIN  Length:245
 aligned with CY1_YEAST | P07143 from UniProtKB/Swiss-Prot  Length:309

    Alignment length:245
                                    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301     
            CY1_YEAST    62 MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPK 306
               SCOP domains d1kyod1 D:62-260 Cytochrome bc1 domain                                                                                                                                                                 d1kyod2 D:261-306                              SCOP domains
               CATH domains ---1kyoD02 D:65-261 Cytochrome c                                                                                                                                                                        1kyoD01 D:262-306                             CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.................hhhhhhhhhhhhhhhhhhh......hhhhhh....hhhhhhhhhh..eeee........eeee............hhhhhhhh..................hhhhhhhhhhh...............ee.......ee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------CYTC  PDB: D:88-241 UniProt: 88-241                                                                                                                       ----------------------------------------------------------------- PROSITE (3)
               Transcript 9 Exon 9.1  PDB: D:62-306 UniProt: 1-309 [INCOMPLETE]                                                                                                                                                                                                   Transcript 9
                 1kyo D  62 MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPK 306
                                    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301     

Chain E from PDB  Type:PROTEIN  Length:185
 aligned with UCRI_YEAST | P08067 from UniProtKB/Swiss-Prot  Length:215

    Alignment length:185
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     
           UCRI_YEAST    31 KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG 215
               SCOP domains d1kyoe2 E:31-86                                         d1kyoe1 E:87-215 ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain                                    SCOP domains
               CATH domains 1kyoE01 E:31-85  [code=1.20.5.270, no name defined]    1kyoE02 E:86-215 'Rieske'-like iron-sulphur domains                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh....eeee........eeeeee..eeeeeee.hhhhhhhhhh.hhhhh....hhhhhh....eeeee..........eeee....eeee....eee...................eee...eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------RIESKE  PDB: E:123-214 UniProt: 123-214                                                     - PROSITE (2)
               Transcript 4 Exon 4.1  PDB: E:31-215 UniProt: 1-215 [INCOMPLETE]                                                                                                                                       Transcript 4
                 1kyo E  31 KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG 215
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     

Chain F from PDB  Type:PROTEIN  Length:74
 aligned with QCR6_YEAST | P00127 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:81
                                    76        86        96       106       116       126       136       146 
           QCR6_YEAST    67 DEEEEEEVTDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK 147
               SCOP domains d       1kyof_ F:                                                                 SCOP domains
               CATH domains 1       kyoF00 F:74-147  [code=1.10.287.20, no name defined]                      CATH domains
               Pfam domains --------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .-------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------- PROSITE
               Transcript 5 Exon 5.1  PDB: F:74-147 (gaps) UniProt: 1-147 [INCOMPLETE]                        Transcript 5
                 1kyo F  74 D-------TDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK 147
                            |       76        86        96       106       116       126       136       146 
                           74      75                                                                        

Chain G from PDB  Type:PROTEIN  Length:125
 aligned with QCR7_YEAST | P00128 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:125
                                    12        22        32        42        52        62        72        82        92       102       112       122     
           QCR7_YEAST     3 QSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK 127
               SCOP domains d1kyog_ G: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)                                        SCOP domains
               CATH domains 1kyoG00 G:3-127 Cytochrome Bc1 Complex; Chain F                                                                               CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.........hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 3 Exon 3.1  PDB: G:3-127 UniProt: 1-127 [INCOMPLETE]                                                                            Transcript 3
                 1kyo G   3 QSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK 127
                                    12        22        32        42        52        62        72        82        92       102       112       122     

Chain H from PDB  Type:PROTEIN  Length:93
 aligned with QCR8_YEAST | P08525 from UniProtKB/Swiss-Prot  Length:94

    Alignment length:93
                                    11        21        31        41        51        61        71        81        91   
           QCR8_YEAST     2 GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV  94
               SCOP domains d1kyoh_ H:                                                                                    SCOP domains
               CATH domains 1kyoH00 H:2-94  [code=1.20.5.210, no name defined]                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................eeeeee.hhhh....................hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
               Transcript 7 Exon 7.1  PDB: H:2-94 UniProt: 1-94 [INCOMPLETE]                                              Transcript 7
                 1kyo H   2 GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV  94
                                    11        21        31        41        51        61        71        81        91   

Chain I from PDB  Type:PROTEIN  Length:53
 aligned with QCR9_YEAST | P22289 from UniProtKB/Swiss-Prot  Length:66

    Alignment length:53
                                    13        23        33        43        53   
           QCR9_YEAST     4 SSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKARI  56
               SCOP domains d1kyoi_ I:                                            SCOP domains
               CATH domains 1kyoI00 I:4-56  [code=1.20.5.260, no name defined]    CATH domains
               Pfam domains ----------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
               Transcript 6 Exon 6.2  PDB: I:4-56 UniProt: 2-66 [INCOMPLETE]      Transcript 6
                 1kyo I   4 SSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKAKI  56
                                    13        23        33        43        53   

Chain J from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains d1kyoj_ J: Immunoglobulin heavy chain variable domain, VH                                                                       SCOP domains
               CATH domains 1kyoJ00 J:1-127 Immunoglobulins                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..ee.....eeeeeeee........eeeeeee.....eeeeeeee....eee..hhhhh....ee....eeeeee...hhhhheeeeeeeeeee...eeeeeee...eeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kyo J   1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAMDYWGQGTTVTVSSAWRHP 127
                                    10        20        30        40        50        60        70        80        90       100       110       120       

Chain K from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains d1kyok_ K: Immunoglobulin light chain kappa variable domain, VL-kappa                                       SCOP domains
               CATH domains 1kyoK00 K:1-107 Immunoglobulins                                                                             CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eee......ee...........eeeeee.....eeeeee...ee..........eee..eeeee..........eeeeee.............eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 1kyo K   1 DIELTQTPVSLAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPSRFSGSGSGTDYSLTISNLEPEDIATYFCQHHIKFPWTFGAGTKLEIK 107
                                    10        20        30        40        50        60        70        80        90       100       

Chain L from PDB  Type:PROTEIN  Length:430
 aligned with QCR1_YEAST | P07256 from UniProtKB/Swiss-Prot  Length:457

    Alignment length:431
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456 
           QCR1_YEAST    27 AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 457
               SCOP domains d1kyol1 L:27-239 C ytochrome bc1 core subunit 1                                                                                                                                                                       d1kyol2 L:240-456 Cytochrome bc1 core subunit 1                                                                                                                                                                           SCOP domains
               CATH domains 1kyoL01 L:27-227 C ytochrome Bc1 Complex; Chain A, domain 1                                                                                                                                               ------1kyoL02 L:234-456 Cytochrome Bc1 Complex; Chain A, domain 1                                                                                                                                                                     CATH domains
           Pfam domains (1) ----------Peptidas-e_M16-1kyoL01 L:37-181                                                                                                                   ----Peptidase_M16_C-1kyoL03 L:186-369                                                                                                                                                       --------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------Peptidas-e_M16-1kyoL02 L:37-181                                                                                                                   ----Peptidase_M16_C-1kyoL04 L:186-369                                                                                                                                                       --------------------------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author ...eee.....eeeee..-...eeeeeee..hhhhh......hhhhhhhhhhhhhhhhhhhhh..eeeeee....eeeeeee...hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh....hhhhhhhhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhhh....................eeeeee......eeeeeeee.......hhhhhhhhhhhhheee..hhhhhh...hhhhhhhh.....eeeeeeee....eeeeeeeee....hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeee......hhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 2 Exon 2.1  PDB: L:27-456 (gaps) UniProt: 1-457 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                      Transcript 2
                 1kyo L  27 AEVTQLSNGIVVATEHNP-AHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEDNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 456
                                    36       |45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455 
                                            44 |                                                                                                                                                                                                                                                                                                                                                                                                                           
                                              45                                                                                                                                                                                                                                                                                                                                                                                                                           

Chain M from PDB  Type:PROTEIN  Length:352
 aligned with QCR2_YEAST | P07257 from UniProtKB/Swiss-Prot  Length:368

    Alignment length:352
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  
           QCR2_YEAST    17 LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL 368
               SCOP domains d1kyom1 M:17-218 Cytochrome bc1 core subunit 2                                                                                                                                                            d1kyom2 M:219-368 Cytochrome bc1 core subunit 2                                                                                                        SCOP domains
               CATH domains 1kyoM01 M:17-227 Cytochrome Bc1 Complex; Chain A, domain 1                                                                                                                                                         ------1kyoM02 M:234-368 Cytochrome Bc1 Complex; Chain A, domain 1                                                                             CATH domains
           Pfam domains (1) Peptidase_M16-1kyoM01 M:17-163                                                                                                                     --Peptidase_M16_C-1kyoM03 M:166-327                                                                                                                                 ----------------------------------------- Pfam domains (1)
           Pfam domains (2) Peptidase_M16-1kyoM02 M:17-163                                                                                                                     --Peptidase_M16_C-1kyoM04 M:166-327                                                                                                                                 ----------------------------------------- Pfam domains (2)
         Sec.struct. author .eee.......eeee.eee..hhhhh...hhhhhhhhhh.......hhhhhhhhhhhhheee..ee....ee..eeee..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.................hhhhhhhhhhhhhhhh.eeee....hhhhhhhhhh.hhhhhh..................eeeee....eeeeeeee....hhhhhhhhhhhhh...........eeeeeee..eeeeeeeeee.hhhhhhhhhhhhhhhhhh............hhhhhh.......................eeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------INSULINASE  PDB: M:37-5--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
              Transcript 10 Exon 10.1  PDB: M:17-368 UniProt: 1-368 [INCOMPLETE]                                                                                                                                                                                                                                                                                                             Transcript 10
                 1kyo M  17 LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL 368
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  

Chain N from PDB  Type:PROTEIN  Length:385
 aligned with CYB_YEAST | P00163 from UniProtKB/Swiss-Prot  Length:385

    Alignment length:385
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380     
            CYB_YEAST     1 MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK 385
               SCOP domains d1kyon3 N:1-261 Mitochondrial cytochrome b subunit, N-terminal domain                                                                                                                                                                                                d1kyon2 N:262-385 Mitochondrial cytochrome b subunit, C-terminal domain                                                      SCOP domains
               CATH domains 1kyoN00 N:1-385 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                   CATH domains
           Pfam domains (1) --------------------------------------------------------------------------------------Cytochrom_B_N_2-1kyoN01 N:87-254                                                                                                                                        ----Cytochrom_B_C-1kyoN03 N:259-360                                                                       ------------------------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------------------------Cytochrom_B_N_2-1kyoN02 N:87-254                                                                                                                                        ----Cytochrom_B_C-1kyoN04 N:259-360                                                                       ------------------------- Pfam domains (2)
         Sec.struct. author .hhhhhh.hhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............eee...hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE CYTB_NTER  PDB: N:1-210 UniProt: 1-210                                                                                                                                                                            CYTB_CTER  PDB: N:211-381 UniProt: 211-381                                                                                                                                 ---- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: N:1-139 UniProt: 1-139                                                                                                      ----Exon 1.3  PDB: N:144-169  -----------------------------------------------------------------------------------Exon 1.5         Exon 1.6  PDB: N:270-385 UniProt: 270-385                                                                            Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------1.2  -------------------------Exon 1.4  PDB: N:169-252 UniProt: 169-252                                           ------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1kyo N   1 MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFTLTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK 385
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380     

Chain O from PDB  Type:PROTEIN  Length:245
 aligned with CY1_YEAST | P07143 from UniProtKB/Swiss-Prot  Length:309

    Alignment length:245
                                    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301     
            CY1_YEAST    62 MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPK 306
               SCOP domains d1kyoo1 O:62-260 Cytochrome bc1 domain                                                                                                                                                                 d1kyoo2 O:261-306                              SCOP domains
               CATH domains ---1kyoO02 O:65-261 Cytochrome c                                                                                                                                                                        1kyoO01 O:262-306                             CATH domains
           Pfam domains (1) --------------Cytochrom_C1-1kyoO01 O:76-295                                                                                                                                                                                               ----------- Pfam domains (1)
           Pfam domains (2) --------------Cytochrom_C1-1kyoO02 O:76-295                                                                                                                                                                                               ----------- Pfam domains (2)
         Sec.struct. author .hhhhhh.................hhhhhhhhhhhhhhhh.........hhhhh.....hhhhhhhhhh..eeee........eeee............hhhhhhhh.......hhhhh......hhhhhhhhhhh...............ee.......ee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------CYTC  PDB: O:88-241 UniProt: 88-241                                                                                                                       ----------------------------------------------------------------- PROSITE (3)
               Transcript 9 Exon 9.1  PDB: O:62-306 UniProt: 1-309 [INCOMPLETE]                                                                                                                                                                                                   Transcript 9
                 1kyo O  62 MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPK 306
                                    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301     

Chain P from PDB  Type:PROTEIN  Length:185
 aligned with UCRI_YEAST | P08067 from UniProtKB/Swiss-Prot  Length:215

    Alignment length:185
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     
           UCRI_YEAST    31 KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG 215
               SCOP domains d1kyop2 P:31-86                                         d1kyop1 P:87-215 ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain                                    SCOP domains
               CATH domains 1kyoP01 P:31-85  [code=1.20.5.270, no name defined]    1kyoP02 P:86-215 'Rieske'-like iron-sulphur domains                                                                                CATH domains
           Pfam domains (1) UCR_TM-1kyoP03 P:31-87                                   ----------------------------Rieske-1kyoP01 P:116-208                                                                     ------- Pfam domains (1)
           Pfam domains (2) UCR_TM-1kyoP04 P:31-87                                   ----------------------------Rieske-1kyoP02 P:116-208                                                                     ------- Pfam domains (2)
         Sec.struct. author ...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eeee.hhh....eeeeee..eeeeeee.hhhhhhhhh..hhhhh....hhhhhh....eeeee..........eeee....eeee....eee.....eee.............ee..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------RIESKE  PDB: P:123-214 UniProt: 123-214                                                     - PROSITE (2)
               Transcript 4 Exon 4.1  PDB: P:31-215 UniProt: 1-215 [INCOMPLETE]                                                                                                                                       Transcript 4
                 1kyo P  31 KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG 215
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     

Chain Q from PDB  Type:PROTEIN  Length:74
 aligned with QCR6_YEAST | P00127 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:81
                                    76        86        96       106       116       126       136       146 
           QCR6_YEAST    67 DEEEEEEVTDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK 147
               SCOP domains d       1kyoq_ Q:                                                                 SCOP domains
               CATH domains 1       kyoQ00 Q:74-147  [code=1.10.287.20, no name defined]                      CATH domains
           Pfam domains (1) --------UCR_hinge-1kyoQ01 Q:75-147                                                Pfam domains (1)
           Pfam domains (2) --------UCR_hinge-1kyoQ02 Q:75-147                                                Pfam domains (2)
         Sec.struct. author .-------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------- PROSITE
               Transcript 5 Exon 5.1  PDB: Q:74-147 (gaps) UniProt: 1-147 [INCOMPLETE]                        Transcript 5
                 1kyo Q  74 D-------TDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK 147
                            |       76        86        96       106       116       126       136       146 
                           74      75                                                                        

Chain R from PDB  Type:PROTEIN  Length:125
 aligned with QCR7_YEAST | P00128 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:125
                                    12        22        32        42        52        62        72        82        92       102       112       122     
           QCR7_YEAST     3 QSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK 127
               SCOP domains d1kyor_ R: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)                                        SCOP domains
               CATH domains 1kyoR00 R:3-127 Cytochrome Bc1 Complex; Chain F                                                                               CATH domains
           Pfam domains (1) ------------UCR_14kD-1kyoR01 R:15-119                                                                                -------- Pfam domains (1)
           Pfam domains (2) ------------UCR_14kD-1kyoR02 R:15-119                                                                                -------- Pfam domains (2)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.........hhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 3 Exon 3.1  PDB: R:3-127 UniProt: 1-127 [INCOMPLETE]                                                                            Transcript 3
                 1kyo R   3 QSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK 127
                                    12        22        32        42        52        62        72        82        92       102       112       122     

Chain S from PDB  Type:PROTEIN  Length:93
 aligned with QCR8_YEAST | P08525 from UniProtKB/Swiss-Prot  Length:94

    Alignment length:93
                                    11        21        31        41        51        61        71        81        91   
           QCR8_YEAST     2 GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV  94
               SCOP domains d1kyos_ S:                                                                                    SCOP domains
               CATH domains 1kyoS00 S:2-94  [code=1.20.5.210, no name defined]                                            CATH domains
           Pfam domains (1) ----------UcrQ-1kyoS01 S:12-91                                                            --- Pfam domains (1)
           Pfam domains (2) ----------UcrQ-1kyoS02 S:12-91                                                            --- Pfam domains (2)
         Sec.struct. author ......................eeeeee.hhhh....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
               Transcript 7 Exon 7.1  PDB: S:2-94 UniProt: 1-94 [INCOMPLETE]                                              Transcript 7
                 1kyo S   2 GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV  94
                                    11        21        31        41        51        61        71        81        91   

Chain T from PDB  Type:PROTEIN  Length:53
 aligned with QCR9_YEAST | P22289 from UniProtKB/Swiss-Prot  Length:66

    Alignment length:53
                                    13        23        33        43        53   
           QCR9_YEAST     4 SSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKARI  56
               SCOP domains d1kyot_ T:                                            SCOP domains
               CATH domains 1kyoT00 T:4-56  [code=1.20.5.260, no name defined]    CATH domains
           Pfam domains (1) UCR_UQCRX_QCR9-1kyoT01 T:4-56                         Pfam domains (1)
           Pfam domains (2) UCR_UQCRX_QCR9-1kyoT02 T:4-56                         Pfam domains (2)
         Sec.struct. author ..hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
               Transcript 6 Exon 6.2  PDB: T:4-56 UniProt: 2-66 [INCOMPLETE]      Transcript 6
                 1kyo T   4 SSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKAKI  56
                                    13        23        33        43        53   

Chain U from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains d1kyou_ U: Immunoglobulin heavy chain variable domain, VH                                                                       SCOP domains
               CATH domains 1kyoU00 U:1-127 Immunoglobulins                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..ee.....eeeeeeee........eeeeeeee...eeeeeeeee....eee..........eee....eeeeee........eeeeeeeeeee...eeeeeee...eeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kyo U   1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAMDYWGQGTTVTVSSAWRHP 127
                                    10        20        30        40        50        60        70        80        90       100       110       120       

Chain V from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains d1kyov_ V: Immunoglobulin light chain kappa variable domain, VL-kappa                                       SCOP domains
               CATH domains 1kyoV00 V:1-107 Immunoglobulins                                                                             CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee....ee........eeee.......eeeeee.....eeeeee...ee...........ee..ee.............ee..ee..............ee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 1kyo V   1 DIELTQTPVSLAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPSRFSGSGSGTDYSLTISNLEPEDIATYFCQHHIKFPWTFGAGTKLEIK 107
                                    10        20        30        40        50        60        70        80        90       100       

Chain W from PDB  Type:PROTEIN  Length:108
 aligned with CYC1_YEAST | P00044 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:108
                                    11        21        31        41        51        61        71        81        91       101        
           CYC1_YEAST     2 TEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYIPGTKMAFGGLKKEKDRNDLITYLKKACE 109
               SCOP domains d1kyow_ W: Mitochondrial cytochrome c                                                                        SCOP domains
               CATH domains 1kyoW00 W:1-108 Cytochrome c                                                                                 CATH domains
               Pfam domains -------Cytochrom_C-1kyoW01 W:8-106                                                                        -- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhh..................................hhhhhhhh...hhhhhhhhh.hhhhhh...........hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) -----CYTC  PDB: W:6-107 UniProt: 7-108                                                                     - PROSITE (2)
               Transcript 8 Exon 8.1  PDB: W:1-108 UniProt: 1-109 [INCOMPLETE]                                                           Transcript 8
                 1kyo W   1 TEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPkKYIPGTKMAFGGLKKEKDRNDLITYLKKACE 108
                                    10        20        30        40        50        60        70      | 80        90       100        
                                                                                                       77-M3L                           

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'