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(-) Description

Title :  STRUCTURAL ANALYSIS OF ATOVAQUONE-INHIBITED CYTOCHROME BC1 COMPLEX REVEALS THE MOLECULAR BASIS OF ANTIMALARIAL DRUG ACTION
 
Authors :  D. Birth, W. -C. Kao, C. Hunte
Date :  17 Apr 14  (Deposition) - 11 Jun 14  (Release) - 20 Apr 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.04
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K  (2x)
Keywords :  Cytochrome Bc1 Complex, Membrane Protein Complex, Antimalarial Drug, Inhibitor, Oxidoreductase-Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Birth, W. C. Kao, C. Hunte
Structural Analysis Of Atovaquone-Inhibited Cytochrome Bc1 Complex Reveals The Molecular Basis Of Antimalarial Drug Action.
Nat Commun V. 5 4029 2014
PubMed-ID: 24893593  |  Reference-DOI: 10.1038/NCOMMS5029

(-) Compounds

Molecule 1 - CYTOCHROME B-C1 COMPLEX SUBUNIT 1, MITOCHONDRIAL
    Chains: A
    Fragment: UNP RESIDUES 27-457
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 1,CORE PROTEIN I,UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 1
 
Molecule 2 - CYTOCHROME B-C1 COMPLEX SUBUNIT 2, MITOCHONDRIAL
    Chains: B
    Fragment: UNP RESIDUES 17-368
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 2,CORE PROTEIN II,UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2
 
Molecule 3 - CYTOCHROME B
    Chains: C
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 3,COMPLEX III SUBUNIT CYTB,COMPLEX III SUBUNIT III,CYTOCHROME B-C1 COMPLEX SUBUNIT 3,CYTOCHROME B-C1 COMPLEX SUBUNIT CYTB,UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CYTOCHROME B SUBUNIT
 
Molecule 4 - CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL
    Chains: D
    Fragment: UNP RESIDUES 62-309
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 4,COMPLEX III SUBUNIT IV,CYTOCHROME B-C1 COMPLEX SUBUNIT 4,UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CYTOCHROME C1 SUBUNIT,CYTOCHROME C-1
 
Molecule 5 - CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
    Chains: E
    EC Number: 1.10.2.2
    Fragment: UNP RESIDUES 31-215
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 5,RIESKE IRON-SULFUR PROTEIN,RISP, UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT
 
Molecule 6 - CYTOCHROME B-C1 COMPLEX SUBUNIT 6
    Chains: F
    Fragment: UNP RESIDUES 74-147
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 6,COMPLEX III SUBUNIT VI,CYTOCHROME C1 NON-HEME 17 KDA PROTEIN,MITOCHONDRIAL HINGE PROTEIN,UBIQUINOL- CYTOCHROME C REDUCTASE COMPLEX 17 KDA PROTEIN
 
Molecule 7 - CYTOCHROME B-C1 COMPLEX SUBUNIT 7
    Chains: G
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 7,COMPLEX III SUBUNIT VII,UBIQUINOL- CYTOCHROME C REDUCTASE C REDUCTASE COMPLEX 14 KDA PROTEIN
 
Molecule 8 - CYTOCHROME B-C1 COMPLEX SUBUNIT 8
    Chains: H
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 8,COMPLEX III SUBUNIT VII,UBIQUINOL- CYTOCHROME C REDUCTASE COMPLEX 11 KDA PROTEIN,UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C
 
Molecule 9 - CYTOCHROME B-C1 COMPLEX SUBUNIT 9
    Chains: I
    Fragment: UNP RESIDUES 2-58
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: COMPLEX III SUBUNIT 9,COMPLEX III SUBUNIT X,CYTOCHROME C1 NON-HEME 7.3 KDA PROTEIN,UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KDA PROTEIN
 
Molecule 10 - IGH PROTEIN
    Chains: J
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: IGH
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
 
Molecule 11 - IG KAPPA CHAIN V-V REGION HP 124E1
    Chains: K
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090

 Structural Features

(-) Chains, Units

  1234567891011
Asymmetric Unit : ABCDEFGHIJK
Biological Unit 1 (2x): ABCDEFGHIJK

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 11)

Asymmetric Unit (7, 11)
No.NameCountTypeFull Name
13PE1Ligand/Ion1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
23PH3Ligand/Ion1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
3AOQ1Ligand/Ion2-[TRANS-4-(4-CHLOROPHENYL)CYCLOHEXYL]-3-HYDROXYNAPHTHALENE-1,4-DIONE
4FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
5HEM3Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6UMQ1Ligand/IonUNDECYL-MALTOSIDE
7UQ61Ligand/Ion5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL
Biological Unit 1 (7, 22)
No.NameCountTypeFull Name
13PE2Ligand/Ion1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
23PH6Ligand/Ion1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
3AOQ2Ligand/Ion2-[TRANS-4-(4-CHLOROPHENYL)CYCLOHEXYL]-3-HYDROXYNAPHTHALENE-1,4-DIONE
4FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
5HEM6Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
6UMQ2Ligand/IonUNDECYL-MALTOSIDE
7UQ62Ligand/Ion5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:427 , ASP A:428 , SER A:453 , MET A:454 , MET A:455 , ARG A:456 , 3PH A:502 , TYR E:57 , SER E:68 , ASN I:14 , ALA I:15 , VAL I:16 , PHE I:17 , VAL I:18binding site for residue UMQ A 501
02AC2SOFTWARESER A:450 , UMQ A:501 , HIS C:222 , ILE C:226 , SER E:67binding site for residue 3PH A 502
03AC3SOFTWAREGLN C:43 , ILE C:44 , GLY C:47 , ILE C:48 , MET C:50 , ALA C:51 , ARG C:79 , HIS C:82 , ALA C:83 , THR C:127 , ALA C:128 , GLY C:131 , TYR C:132 , VAL C:135 , PHE C:180 , HIS C:183 , TYR C:184 , PRO C:187binding site for residue HEM C 4001
04AC4SOFTWARETRP C:30 , GLY C:33 , SER C:34 , LEU C:36 , HIS C:96 , MET C:97 , LYS C:99 , SER C:105 , LEU C:113 , TRP C:114 , GLY C:117 , VAL C:118 , ILE C:120 , VAL C:194 , HIS C:197 , LEU C:201 , SER C:206 , SER C:207binding site for residue HEM C 4002
05AC5SOFTWAREPHE C:129 , MET C:139 , GLY C:143 , VAL C:146 , ILE C:147 , ILE C:269 , PRO C:271 , LEU C:275 , TYR C:279 , ILE C:299 , HIS E:181binding site for residue AOQ C 4003
06AC6SOFTWAREPHE C:3 , ASN C:7 , TYR C:9 , LEU C:10 , THR C:112 , ASN C:115 , VAL C:116 , HIS C:204binding site for residue 3PE C 4004
07AC7SOFTWARETYR C:16 , GLN C:22 , SER C:34 , ILE C:48 , LEU C:182 , LEU C:185 , ALA C:191 , LEU C:201 , SER C:206 , MET C:221 , ASP C:229binding site for residue UQ6 C 4005
08AC8SOFTWARETRP C:29 , MET C:95 , MET C:97 , ALA C:98 , TYR C:102 , TYR C:103 , LEU C:302 , THR C:317 , PHE C:333binding site for residue 3PH C 4006
09AC9SOFTWAREVAL D:100 , CYS D:101 , CYS D:104 , HIS D:105 , ASN D:169 , ALA D:172 , PRO D:175 , ILE D:180 , ARG D:184 , TYR D:190 , ILE D:191 , LEU D:195 , PHE D:218 , MET D:225 , VAL D:228 , VAL D:251binding site for residue HEM D 401
10AD1SOFTWARECYS E:159 , HIS E:161 , LEU E:162 , CYS E:178 , CYS E:180 , HIS E:181 , SER E:183binding site for residue FES E 301
11AD2SOFTWAREILE C:42 , MET C:237 , LEU D:269 , LYS D:272 , THR D:273 , ILE D:276 , GLY E:70 , ALA E:71 , SER E:73 , THR E:74 , THR E:77binding site for residue 3PH E 302

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1E:164 -E:180
2F:101 -F:123
3J:22 -J:96
4K:23 -K:88

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Ser C:108 -Pro C:109
2His C:222 -Ser C:223
3Val C:346 -Pro C:347
4Thr K:7 -Pro K:8
5Glu K:79 -Pro K:80
6Phe K:94 -Pro K:95

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PD4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PD4)

(-) Exons   (0, 0)

(no "Exon" information available for 4PD4)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:431
                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee...eeeeee......eeeeeee............hhhhhhhhhh.hhhhhhhhhhh..eeeeee....eeeeeee....hhhhhhhhhhhhh..........hhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh..hhhhh............hhhhhhhhhhhhh....eeeeeee..hhhhhhhhhh......................eeeeee......eeeeeeee.......hhhhhhhhhhhhheee..hhhhhh...hhhhhhh......eeeeeeee....eeeeeeeee....hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeee......hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 A  27 AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEDNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 457
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456 


Chain B from PDB  Type:PROTEIN  Length:352
                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee........eee..eee..hhhhh...hhhhhhhh.........hhhhhhhhhhhhh.ee..ee....ee..eeee..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhh.eee.....hhhhhhhhhhhhhhhhh..................eeeee....eeeeee......hhhhhhhhhhhhh...hhhhhh..eeeeee....eeeeeeeee.hhhhhhhh..hhhhhhhhhee.hhhhhhhhhhhhh.................ee.....eeeeeehhhhh.hhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 B  17 LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL 368
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  


Chain C from PDB  Type:PROTEIN  Length:385
                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.hhhhhhh.....eee.......hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh......hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............eee..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 C   1 MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK 385
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380     


Chain D from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.................hhhhhhhhhhhhhhhhhhh......hhhhhh....hhhhhhhhhhh.............................hhhhhhhh..................hhhhhhhhhh................ee.......ee......................hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 D  62 MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPKPRK 309
                                    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301        


Chain E from PDB  Type:PROTEIN  Length:185
                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............eee........eeeeee..eeeeeee.hhhhhhhhh...........hhhhhh....eeeee..........eeee...eeeee....eeee...................eee..eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 E  31 KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG 215
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     


Chain F from PDB  Type:PROTEIN  Length:74
                                                                                                          
               SCOP domains -------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.....hhhhhhhhhhhhhhhhh.hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------- Transcript
                 4pd4 F  74 VTDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK 147
                                    83        93       103       113       123       133       143    


Chain G from PDB  Type:PROTEIN  Length:126
                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh...hhhhhhh....hhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4pd4 G   2 PQSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK 127
                                    11        21        31        41        51        61        71        81        91       101       111       121      


Chain H from PDB  Type:PROTEIN  Length:93
                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................eeee...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                 4pd4 H   2 GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV  94
                                    11        21        31        41        51        61        71        81        91   


Chain I from PDB  Type:PROTEIN  Length:57
                                                                                         
               SCOP domains --------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------- Transcript
                 4pd4 I   2 SFSSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKARIAA  58
                                    11        21        31        41        51       


Chain J from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee.ee....eeeeeeeee........eeeeeee.....eeeeeeee....eee..........eee....eee..ee..hhhhheeeeeeeee.......eeeee...eeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 J   1 EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAMDYWGQGTTVTVSSAWRHP 127
                                    10        20        30        40        50        60        70        80        90       100       110       120       


Chain K from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................eee........eeeeee.....eeeeee...ee...........ee..eee...............eee................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 4pd4 K   1 DIELTQTPVSLAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPSRFSGSGSGTDYSLTISNLEPEDIATYFCQHHIKFPWTFGAGTKLEIK 107
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CY1_YEAST | P07143: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        CYB_YEAST | P00163: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        KV5AE_MOUSE | P01647: 1ezv 2v7h 2vwe 3u0w
        QCR1_YEAST | P07256: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        QCR2_YEAST | P07257: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        QCR6_YEAST | P00127: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        QCR7_YEAST | P00128: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        QCR8_YEAST | P08525: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        QCR9_YEAST | P22289: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh
        UCRI_YEAST | P08067: 1ezv 1kb9 1kyo 1p84 2ibz 3cx5 3cxh

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4PD4)