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(-) Description

Title :  MREB FROM THERMOTOGA MARITIMA, AMPPNP
 
Authors :  F. Van Den Ent, L. A. Amos, J. Lowe
Date :  09 Jun 01  (Deposition) - 19 Sep 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Mreb, Rod-Shape Determining, Mbl, Actin, Hsp-70, Ftsz, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Van Den Ent, L. A. Amos, J. Lowe
Prokaryotic Origin Of The Actin Cytoskeleton.
Nature V. 413 39 2001
PubMed-ID: 11544518  |  Reference-DOI: 10.1038/35092500
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ROD SHAPE-DETERMINING PROTEIN MREB
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHIS17
    Expression System Strain: C41
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TM0588
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2MG1Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:315 , ANP A:346BINDING SITE FOR RESIDUE MG A 345
2AC2SOFTWARETHR A:12 , ALA A:13 , ASN A:14 , GLU A:131 , GLY A:155 , GLY A:156 , GLY A:157 , THR A:158 , GLY A:179 , GLU A:204 , LYS A:207 , ILE A:208 , GLY A:285 , GLY A:286 , GLY A:287 , LEU A:289 , LEU A:290 , MG A:345BINDING SITE FOR RESIDUE ANP A 346

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1JCG)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1JCG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1JCG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1JCG)

(-) Exons   (0, 0)

(no "Exon" information available for 1JCG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:335
 aligned with Q9WZ57_THEMA | Q9WZ57 from UniProtKB/TrEMBL  Length:336

    Alignment length:335
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330     
         Q9WZ57_THEMA     1 MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGA 335
               SCOP domains d1jcga1 A:1-140 Prokaryotic actin homolog MreB                                                                                              d1jcga2 A:141-335 Prokaryotic actin homolog MreB                                                                                                                                                    SCOP domains
               CATH domains 1jcgA01 A:1-139,A:312-334  [code=3.30.420.40, no name defined]                                                                             ------1jcgA02 A:146-176,A:254-311    -1jcgA03 A:178-253 Actin; Chain A, domain 4                                  1jcgA02 A:146-176,A:254-311                               1jcgA01                - CATH domains
               Pfam domains --MreB_Mbl-1jcgA01 A:3-331                                                                                                                                                                                                                                                                                                                 ---- Pfam domains
         Sec.struct. author ....eeeeee...eeeeee...eeeeeee..eeee.....eeeehhhhhh........eeee..ee..ee.hhhhhhhhhhhhhhhhhh.......eeeeee....hhhhhhhhhhhhhh....eeeeeehhhhhhhh..........eeeeee....eeeeeee..eeeeeeee..hhhhhhhhhhhhhhhhhhee.hhhhhhhhhhhhh....hhhhhh.eeeeeeee....eeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhheeeehhhhh..hhhhhhhhhhh..eee.....hhhhhhhhhh..hhhhhh..ee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jcg A   1 MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGA 335
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 3)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: Actin_ATPase (173)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q9WZ57_THEMA | Q9WZ57)
molecular function
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0000902    cell morphogenesis    The developmental process in which the size or shape of a cell is generated and organized.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9WZ57_THEMA | Q9WZ57: 1jce 1jcf 2wus

(-) Related Entries Specified in the PDB File

1jce 1JCE CONTAINS THE SAME PROTEIN LABELED WITH SELENOMETHIONINE.
1jcf 1JCF CONTAINS THE SAME PROTEIN (WILD TYPE).