1GUM - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   HUMAN GLUTATHIONE TRANSFERASE A4-4 WITHOUT LIGANDS

Authors :   C. M. Bruns, I. Hubatsch, M. Ridderstrom, B. Mannervik, J. A. Tainer

Date :   11 Jun 98 (Deposition) - 27 Jan 99 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.00

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)

Keywords :   Glutathione Transferase, Oxidative Stress, Alkenal Degradation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. M. Bruns, I. Hubatsch, M. Ridderstrom, B. Mannervik, J. A. Tainer
Human Glutathione Transferase A4-4 Crystal Structures And Mutagenesis Reveal The Basis Of High Catalytic Efficiency With Toxic Lipid Peroxidation Products
J. Mol. Biol. V. 288 427 1999
PubMed-ID: 10329152 | Reference-DOI: 10.1006/JMBI.1999.2697
(for further references see the PDB file header)

Molecule 1 - PROTEIN (GLUTATHIONE TRANSFERASE A4-4)
	Chains	:	A, B, C, D, E, F, G, H
	EC Number	:	2.5.1.18
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Cellular Location	:	CYTOPLASM
	Expression System Strain	:	JM109
	Expression System Taxid	:	562
	Expression System Vector	:	PKK-D
	Organ	:	BRAIN
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	GLUTATHIONE S-TRANSFERASE, GST
	Tissue	:	SUBSTANTIA NIGRA

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1GUM)

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	GTA	AUTHOR	TYR A:9 , ARG A:15 , LEU A:41 , GLN A:45 , GLN A:54 , VAL A:55 , GLN A:67 , THR A:68 , ASP A:101 , ARG A:131 , PHE A:220	GLUTATHIONE BINDING SITE.
02	GTB	AUTHOR	TYR B:9 , ARG B:15 , LEU B:41 , GLN B:45 , GLN B:54 , VAL B:55 , GLN B:67 , THR B:68 , ASP B:101 , ARG B:131 , PHE B:220	GLUTATHIONE BINDING SITE.
03	GTC	AUTHOR	TYR C:9 , ARG C:15 , LEU C:41 , GLN C:45 , GLN C:54 , VAL C:55 , GLN C:67 , THR C:68 , ASP C:101 , ARG C:131 , PHE C:220	GLUTATHIONE BINDING SITE.
04	GTD	AUTHOR	TYR D:9 , ARG D:15 , LEU D:41 , GLN D:45 , GLN D:54 , VAL D:55 , GLN D:67 , THR D:68 , ASP D:101 , ARG D:131 , PHE D:220	GLUTATHIONE BINDING SITE.
05	GTE	AUTHOR	TYR E:9 , ARG E:15 , LEU E:41 , GLN E:45 , GLN E:54 , VAL E:55 , GLN E:67 , THR E:68 , ASP E:101 , ARG E:131 , PHE E:220	GLUTATHIONE BINDING SITE.
06	GTF	AUTHOR	TYR F:9	GLUTATHIONE BINDING SITE.
07	GTG	AUTHOR	TYR G:9 , ARG G:15 , LEU G:41 , GLN G:45 , GLN G:54 , VAL G:55 , GLN G:67 , THR G:68 , ASP G:101 , ARG G:131 , PHE G:220	GLUTATHIONE BINDING SITE.
08	GTH	AUTHOR	TYR H:9 , ARG H:15 , LEU H:41 , GLN H:45 , GLN H:54 , VAL H:55 , GLN H:67 , THR H:68 , ASP H:101 , ARG H:131 , PHE H:220	GLUTATHIONE BINDING SITE.
09	HTA	AUTHOR	GLY A:14 , GLU A:104 , ILE A:107 , MET A:108 , PHE A:111 , TYR A:212 , VAL A:216 , TYR A:217	ELECTROPHILIC SUBSTRATE BINDING SITE.
10	HTB	AUTHOR	GLY B:14 , GLU B:104 , ILE B:107 , MET B:108 , PHE B:111 , TYR B:212 , VAL B:216 , TYR B:217	ELECTROPHILIC SUBSTRATE BINDING SITE.
11	HTC	AUTHOR	GLY C:14 , GLU C:104 , ILE C:107 , MET C:108 , PHE C:111 , TYR C:212 , VAL C:216 , TYR C:217	ELECTROPHILIC SUBSTRATE BINDING SITE.
12	HTD	AUTHOR	GLY D:14 , GLU D:104 , ILE D:107 , MET D:108 , PHE D:111 , TYR D:212 , VAL D:216 , TYR D:217	ELECTROPHILIC SUBSTRATE BINDING SITE.
13	HTE	AUTHOR	GLY E:14 , GLU E:104 , ILE E:107 , MET E:108 , PHE E:111 , TYR E:212 , VAL E:216 , TYR E:217	ELECTROPHILIC SUBSTRATE BINDING SITE.
14	HTF	AUTHOR	GLY F:14	ELECTROPHILIC SUBSTRATE BINDING SITE.
15	HTG	AUTHOR	GLY G:14 , GLU G:104 , ILE G:107 , MET G:108 , PHE G:111 , TYR G:212 , VAL G:216 , TYR G:217	ELECTROPHILIC SUBSTRATE BINDING SITE.
16	HTH	AUTHOR	GLY H:14 , GLU H:104 , ILE H:107 , MET H:108 , PHE H:111 , TYR H:212 , VAL H:216 , TYR H:217	ELECTROPHILIC SUBSTRATE BINDING SITE.

(no "SS Bond" information available for 1GUM)

Asymmetric Unit

No.	Residues
1	Val A:55	-	Pro A:56
2	Val B:55	-	Pro B:56
3	Val C:55	-	Pro C:56
4	Val D:55	-	Pro D:56
5	Val E:55	-	Pro E:56
6	Val F:55	-	Pro F:56
7	Val G:55	-	Pro G:56
8	Val H:55	-	Pro H:56

Asymmetric Unit (2, 16)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022210	L	100	P	GSTA4_HUMAN	Polymorphism	45551133	A/B/C/D/E/F/G/H	L	100	P
2	UniProt	VAR_022211	T	163	A	GSTA4_HUMAN	Polymorphism	4147617	A/B/C/D/E/F/G/H	T	163	A

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022210	L	100	P	GSTA4_HUMAN	Polymorphism	45551133	A/B	L	100	P
2	UniProt	VAR_022211	T	163	A	GSTA4_HUMAN	Polymorphism	4147617	A/B	T	163	A

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022210	L	100	P	GSTA4_HUMAN	Polymorphism	45551133	C/D	L	100	P
2	UniProt	VAR_022211	T	163	A	GSTA4_HUMAN	Polymorphism	4147617	C/D	T	163	A

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022210	L	100	P	GSTA4_HUMAN	Polymorphism	45551133	E/F	L	100	P
2	UniProt	VAR_022211	T	163	A	GSTA4_HUMAN	Polymorphism	4147617	E/F	T	163	A

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022210	L	100	P	GSTA4_HUMAN	Polymorphism	45551133	G/H	L	100	P
2	UniProt	VAR_022211	T	163	A	GSTA4_HUMAN	Polymorphism	4147617	G/H	T	163	A

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTA4_HUMAN	85-208	8	A:85-208 B:85-208 C:85-208 D:85-208 E:85-208 F:85-208 G:85-208 H:85-208

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTA4_HUMAN	85-208	2	A:85-208 B:85-208 - - - - - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTA4_HUMAN	85-208	2	- - C:85-208 D:85-208 - - - -

Biological Unit 3 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTA4_HUMAN	85-208	2	- - - - E:85-208 F:85-208 - -

Biological Unit 4 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTA4_HUMAN	85-208	2	- - - - - - G:85-208 H:85-208

Asymmetric Unit (6, 48)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1a	ENST00000370963	1a	ENSE00001454017	chr6:52860176-52860047	130	GSTA4_HUMAN	-	0	0	-	-
1.3b	ENST00000370963	3b	ENSE00002148969	chr6:52859059-52858955	105	GSTA4_HUMAN	1-29	29	8	A:4-29 B:4-29 C:4-29 D:4-29 E:4-29 F:4-29 G:4-29 H:4-29	26 26 26 26 26 26 26 26
1.4b	ENST00000370963	4b	ENSE00002179898	chr6:52852206-52852155	52	GSTA4_HUMAN	30-47	18	8	A:30-47 B:30-47 C:30-47 D:30-47 E:30-47 F:30-47 G:30-47 H:30-47	18 18 18 18 18 18 18 18
1.5	ENST00000370963	5	ENSE00002153494	chr6:52850381-52850249	133	GSTA4_HUMAN	47-91	45	8	A:47-91 B:47-91 C:47-91 D:47-91 E:47-91 F:47-91 G:47-91 H:47-91	45 45 45 45 45 45 45 45
1.6	ENST00000370963	6	ENSE00002191487	chr6:52849403-52849262	142	GSTA4_HUMAN	91-138	48	8	A:91-138 B:91-138 C:91-138 D:91-138 E:91-138 F:91-138 G:91-138 H:91-138	48 48 48 48 48 48 48 48
1.7	ENST00000370963	7	ENSE00002156856	chr6:52847503-52847372	132	GSTA4_HUMAN	139-182	44	8	A:139-182 B:139-182 C:139-182 D:139-182 E:139-182 F:139-182 G:139-182 H:139-182	44 44 44 44 44 44 44 44
1.8c	ENST00000370963	8c	ENSE00002153108	chr6:52843390-52842751	640	GSTA4_HUMAN	183-222	40	8	A:183-220 B:183-220 C:183-220 D:183-220 E:183-220 F:183-220 G:183-220 H:183-220	38 38 38 38 38 38 38 38

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1guma2 A:4-80 Class alpha GST                                               d1guma1 A:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumA01 A:4-81,A:191-209 Glutaredoxin                                         1gumA02 A:82-190  [code=1.20.1050.10, no name defined]                                                       1gumA01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: A:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: A:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: A:91-138 UniProt: 91-138         Exon 1.7  PDB: A:139-182 UniProt: 139-182   Exon 1.8c  PDB: A:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: A:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum A   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain B from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gumb2 B:4-80 Class alpha GST                                               d1gumb1 B:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumB01 B:4-81,B:191-209 Glutaredoxin                                         1gumB02 B:82-190  [code=1.20.1050.10, no name defined]                                                       1gumB01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: B:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: B:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: B:91-138 UniProt: 91-138         Exon 1.7  PDB: B:139-182 UniProt: 139-182   Exon 1.8c  PDB: B:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: B:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum B   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain C from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gumc2 C:4-80 Class alpha GST                                               d1gumc1 C:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumC01 C:4-81,C:191-209 Glutaredoxin                                         1gumC02 C:82-190  [code=1.20.1050.10, no name defined]                                                       1gumC01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: C:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: C:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: C:91-138 UniProt: 91-138         Exon 1.7  PDB: C:139-182 UniProt: 139-182   Exon 1.8c  PDB: C:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: C:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum C   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain D from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gumd2 D:4-80 Class alpha GST                                               d1gumd1 D:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumD01 D:4-81,D:191-209 Glutaredoxin                                         1gumD02 D:82-190  [code=1.20.1050.10, no name defined]                                                       1gumD01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: D:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: D:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: D:91-138 UniProt: 91-138         Exon 1.7  PDB: D:139-182 UniProt: 139-182   Exon 1.8c  PDB: D:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: D:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum D   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain E from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gume2 E:4-80 Class alpha GST                                               d1gume1 E:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumE01 E:4-81,E:191-209 Glutaredoxin                                         1gumE02 E:82-190  [code=1.20.1050.10, no name defined]                                                       1gumE01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: E:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: E:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: E:91-138 UniProt: 91-138         Exon 1.7  PDB: E:139-182 UniProt: 139-182   Exon 1.8c  PDB: E:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: E:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum E   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain F from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gumf2 F:4-80 Class alpha GST                                               d1gumf1 F:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumF01 F:4-81,F:191-209 Glutaredoxin                                         1gumF02 F:82-190  [code=1.20.1050.10, no name defined]                                                       1gumF01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: F:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: F:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: F:91-138 UniProt: 91-138         Exon 1.7  PDB: F:139-182 UniProt: 139-182   Exon 1.8c  PDB: F:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: F:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum F   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain G from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gumg2 G:4-80 Class alpha GST                                               d1gumg1 G:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumG01 G:4-81,G:191-209 Glutaredoxin                                         1gumG02 G:82-190  [code=1.20.1050.10, no name defined]                                                       1gumG01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: G:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: G:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: G:91-138 UniProt: 91-138         Exon 1.7  PDB: G:139-182 UniProt: 139-182   Exon 1.8c  PDB: G:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: G:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum G   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Chain H from PDB  Type:PROTEIN  Length:217
 aligned with GSTA4_HUMAN | O15217 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:217
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       
          GSTA4_HUMAN     4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
               SCOP domains d1gumh2 H:4-80 Class alpha GST                                               d1gumh1 H:81-220 Class alpha GST                                                                                                             SCOP domains
               CATH domains 1gumH01 H:4-81,H:191-209 Glutaredoxin                                         1gumH02 H:82-190  [code=1.20.1050.10, no name defined]                                                       1gumH01            ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.....hhhhhhhhhh....eeeeee..hhhhhhhhh..........eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh.............hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhhh.hhhhhhh...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------P--------------------------------------------------------------A--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------GST_CTER  PDB: H:85-208 UniProt: 85-208                                                                                     ------------ PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: H:4-29    Exon 1.4b         -------------------------------------------Exon 1.6  PDB: H:91-138 UniProt: 91-138         Exon 1.7  PDB: H:139-182 UniProt: 139-182   Exon 1.8c  PDB: H:183-220 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: H:47-91 UniProt: 47-91        --------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gum H   4 RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIF 220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: GST C-terminal domain-like (353)

Superfamily: GST C-terminal domain-like (353)

Family: Glutathione S-transferase (GST), C-terminal domain (263)

Protein domain: Class alpha GST (53)

Human (Homo sapiens), (a1-1) [TaxId: 9606] (27)

1a	d1guma1	A:81-220
1b	d1gumb1	B:81-220
1c	d1gumc1	C:81-220
1d	d1gumd1	D:81-220
1e	d1gume1	E:81-220
1f	d1gumf1	F:81-220
1g	d1gumg1	G:81-220
1h	d1gumh1	H:81-220

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thioredoxin fold (994)

Superfamily: Thioredoxin-like (992)

Family: Glutathione S-transferase (GST), N-terminal domain (216)

Protein domain: Class alpha GST (53)

Human (Homo sapiens), (a1-1) [TaxId: 9606] (27)

2a	d1guma2	A:4-80
2b	d1gumb2	B:4-80
2c	d1gumc2	C:4-80
2d	d1gumd2	D:4-80
2e	d1gume2	E:4-80
2f	d1gumf2	F:4-80
2g	d1gumg2	G:4-80
2h	d1gumh2	H:4-80

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Glutaredoxin (620)

Homologous Superfamily: Glutaredoxin (617)

Human (Homo sapiens) (186)

1a	1gumA01	A:4-81,A:191-209
1b	1gumB01	B:4-81,B:191-209
1c	1gumC01	C:4-81,C:191-209
1d	1gumD01	D:4-81,D:191-209
1e	1gumE01	E:4-81,E:191-209
1f	1gumF01	F:4-81,F:191-209
1g	1gumG01	G:4-81,G:191-209
1h	1gumH01	H:4-81,H:191-209

Class: Mainly Alpha (13335)

Architecture: Up-down Bundle (3216)

Topology: Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 (267)

Homologous Superfamily: [code=1.20.1050.10, no name defined] (249)

Human (Homo sapiens) (119)

2a	1gumA02	A:82-190
2b	1gumB02	B:82-190
2c	1gumC02	C:82-190
2d	1gumD02	D:82-190
2e	1gumE02	E:82-190
2f	1gumF02	F:82-190
2g	1gumG02	G:82-190
2h	1gumH02	H:82-190

(no "Pfam Domain" information available for 1GUM)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (GSTA4_HUMAN | O15217)

molecular function
	GO:0004364	glutathione transferase activity	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:1901687	glutathione derivative biosynthetic process	The chemical reactions and pathways resulting in the formation of glutathione derivative.
	GO:0006749	glutathione metabolic process	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0006805	xenobiotic metabolic process	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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		Val F:55 - Pro F:56	[ RasMol ]
		Val G:55 - Pro G:56	[ RasMol ]
		Val H:55 - Pro H:56	[ RasMol ]

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	1gum
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	GSTA4_HUMAN \| O15217	:	1gul 3ik7

(no "Related Entries Specified in the PDB File" available for 1GUM)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (16, 16)

SS Bonds (0, 0)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 16)

PROSITE Motifs (1, 8)

Exons (6, 48)

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