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1GUM
Biol. Unit 1
Info
Asym.Unit (293 KB)
Biol.Unit 1 (75 KB)
Biol.Unit 2 (75 KB)
Biol.Unit 3 (76 KB)
Biol.Unit 4 (76 KB)
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Title
:
HUMAN GLUTATHIONE TRANSFERASE A4-4 WITHOUT LIGANDS
Authors
:
C. M. Bruns, I. Hubatsch, M. Ridderstrom, B. Mannervik, J. A. Tainer
Date
:
11 Jun 98 (Deposition) - 27 Jan 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Glutathione Transferase, Oxidative Stress, Alkenal Degradation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. M. Bruns, I. Hubatsch, M. Ridderstrom, B. Mannervik, J. A. Tainer
Human Glutathione Transferase A4-4 Crystal Structures And Mutagenesis Reveal The Basis Of High Catalytic Efficiency With Toxic Lipid Peroxidation Products
J. Mol. Biol. V. 288 427 1999
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(4, 4)
Info
All Sites
1: GTA (AUTHOR)
2: GTB (AUTHOR)
3: HTA (AUTHOR)
4: HTB (AUTHOR)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
GTA
AUTHOR
TYR A:9 , ARG A:15 , LEU A:41 , GLN A:45 , GLN A:54 , VAL A:55 , GLN A:67 , THR A:68 , ASP A:101 , ARG A:131 , PHE A:220
GLUTATHIONE BINDING SITE.
2
GTB
AUTHOR
TYR B:9 , ARG B:15 , LEU B:41 , GLN B:45 , GLN B:54 , VAL B:55 , GLN B:67 , THR B:68 , ASP B:101 , ARG B:131 , PHE B:220
GLUTATHIONE BINDING SITE.
3
HTA
AUTHOR
GLY A:14 , GLU A:104 , ILE A:107 , MET A:108 , PHE A:111 , TYR A:212 , VAL A:216 , TYR A:217
ELECTROPHILIC SUBSTRATE BINDING SITE.
4
HTB
AUTHOR
GLY B:14 , GLU B:104 , ILE B:107 , MET B:108 , PHE B:111 , TYR B:212 , VAL B:216 , TYR B:217
ELECTROPHILIC SUBSTRATE BINDING SITE.
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SAPs(SNPs)/Variants
(2, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_022210 (L100P, chain A/B, )
2: VAR_022211 (T163A, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_022210
L
100
P
GSTA4_HUMAN
Polymorphism
45551133
A/B
L
100
P
2
UniProt
VAR_022211
T
163
A
GSTA4_HUMAN
Polymorphism
4147617
A/B
T
163
A
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: GST_CTER (A:85-208,B:85-208)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTA4_HUMAN
85-208
2
A:85-208
B:85-208
-
-
-
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d1guma1 (A:81-220)
1b: SCOP_d1gumb1 (B:81-220)
1c: SCOP_d1gumc1 (C:81-220)
1d: SCOP_d1gumd1 (D:81-220)
1e: SCOP_d1gume1 (E:81-220)
1f: SCOP_d1gumf1 (F:81-220)
1g: SCOP_d1gumg1 (G:81-220)
1h: SCOP_d1gumh1 (H:81-220)
2a: SCOP_d1guma2 (A:4-80)
2b: SCOP_d1gumb2 (B:4-80)
2c: SCOP_d1gumc2 (C:4-80)
2d: SCOP_d1gumd2 (D:4-80)
2e: SCOP_d1gume2 (E:4-80)
2f: SCOP_d1gumf2 (F:4-80)
2g: SCOP_d1gumg2 (G:4-80)
2h: SCOP_d1gumh2 (H:4-80)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
1a
d1guma1
A:81-220
1b
d1gumb1
B:81-220
1c
d1gumc1
C:81-220
1d
d1gumd1
D:81-220
1e
d1gume1
E:81-220
1f
d1gumf1
F:81-220
1g
d1gumg1
G:81-220
1h
d1gumh1
H:81-220
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
2a
d1guma2
A:4-80
2b
d1gumb2
B:4-80
2c
d1gumc2
C:4-80
2d
d1gumd2
D:4-80
2e
d1gume2
E:4-80
2f
d1gumf2
F:4-80
2g
d1gumg2
G:4-80
2h
d1gumh2
H:4-80
[
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CATH Domains
(2, 16)
Info
all CATH domains
1a: CATH_1gumA01 (A:4-81,A:191-209)
1b: CATH_1gumB01 (B:4-81,B:191-209)
1c: CATH_1gumC01 (C:4-81,C:191-209)
1d: CATH_1gumD01 (D:4-81,D:191-209)
1e: CATH_1gumE01 (E:4-81,E:191-209)
1f: CATH_1gumF01 (F:4-81,F:191-209)
1g: CATH_1gumG01 (G:4-81,G:191-209)
1h: CATH_1gumH01 (H:4-81,H:191-209)
2a: CATH_1gumA02 (A:82-190)
2b: CATH_1gumB02 (B:82-190)
2c: CATH_1gumC02 (C:82-190)
2d: CATH_1gumD02 (D:82-190)
2e: CATH_1gumE02 (E:82-190)
2f: CATH_1gumF02 (F:82-190)
2g: CATH_1gumG02 (G:82-190)
2h: CATH_1gumH02 (H:82-190)
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(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Human (Homo sapiens)
(186)
1a
1gumA01
A:4-81,A:191-209
1b
1gumB01
B:4-81,B:191-209
1c
1gumC01
C:4-81,C:191-209
1d
1gumD01
D:4-81,D:191-209
1e
1gumE01
E:4-81,E:191-209
1f
1gumF01
F:4-81,F:191-209
1g
1gumG01
G:4-81,G:191-209
1h
1gumH01
H:4-81,H:191-209
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Human (Homo sapiens)
(119)
2a
1gumA02
A:82-190
2b
1gumB02
B:82-190
2c
1gumC02
C:82-190
2d
1gumD02
D:82-190
2e
1gumE02
E:82-190
2f
1gumF02
F:82-190
2g
1gumG02
G:82-190
2h
1gumH02
H:82-190
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Pfam Domains
(0, 0)
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Asym.Unit (293 KB)
Header - Asym.Unit
Biol.Unit 1 (75 KB)
Header - Biol.Unit 1
Biol.Unit 2 (75 KB)
Header - Biol.Unit 2
Biol.Unit 3 (76 KB)
Header - Biol.Unit 3
Biol.Unit 4 (76 KB)
Header - Biol.Unit 4
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