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(-) Description

Title :  STRUCTURE OF STREPTOCOCCAL PYROGENIC EXOTOXIN A
 
Authors :  C. A. Earhart, G. M. Vath, M. Roggiani, P. M. Schlievert, D. H. Ohlendorf
Date :  23 Aug 00  (Deposition) - 17 Nov 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.94
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Superantigen, Exotoxin A (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. A. Earhart, G. M. Vath, M. Roggiani, P. M. Schlievert, D. H. Ohlendorf
Structure Of Streptococcal Pyrogenic Exotoxin A Reveals A Novel Metal Cluster.
Protein Sci. V. 9 1847 2000
PubMed-ID: 11045630
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - EXOTOXIN TYPE A PRECURSOR (ALLELE 1)
    Chains: A, B, C, D
    Organism Scientific: STREPTOCOCCUS PYOGENES PHAGE T12
    Organism Taxid: 35344
    Strain: PHAGE T12

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 15)

Asymmetric/Biological Unit (1, 15)
No.NameCountTypeFull Name
1CD15Ligand/IonCADMIUM ION

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:90 , HOH A:3000 , HOH A:3008 , HOH B:3003BINDING SITE FOR RESIDUE CD A 222
02AC2SOFTWAREASP A:39 , HOH A:2128 , HOH A:3007 , HOH A:3008 , HOH A:3010BINDING SITE FOR RESIDUE CD A 223
03AC3SOFTWARECYS A:90 , HOH A:3002 , HOH A:3007 , GLU C:691 , HOH C:3001BINDING SITE FOR RESIDUE CD C 224
04AC4SOFTWARELYS A:221 , HOH A:2128 , HOH A:3000 , HOH A:3010 , HOH C:3001BINDING SITE FOR RESIDUE CD A 225
05AC5SOFTWAREHOH A:3018 , CYS B:390 , HOH B:3015 , HOH B:3019BINDING SITE FOR RESIDUE CD B 522
06AC6SOFTWAREASP B:339 , HOH B:2112 , HOH B:3015 , HOH B:3016BINDING SITE FOR RESIDUE CD B 523
07AC7SOFTWARECYS B:390 , HOH B:2112 , HOH B:3014 , HOH B:3017 , GLU D:991BINDING SITE FOR RESIDUE CD D 524
08AC8SOFTWAREHOH A:3018 , HOH A:4229 , HOH B:3014 , HOH B:3016BINDING SITE FOR RESIDUE CD B 525
09AC9SOFTWARECYS C:690 , HOH C:3004 , HOH C:3005 , HOH C:4062BINDING SITE FOR RESIDUE CD C 822
10BC1SOFTWAREASP C:639 , CD C:825 , HOH C:2103 , HOH C:3004 , HOH C:4000BINDING SITE FOR RESIDUE CD C 823
11BC2SOFTWAREGLU A:91 , CYS C:690 , HOH C:2103 , HOH C:3006 , HOH C:4243BINDING SITE FOR RESIDUE CD A 824
12BC3SOFTWARECD C:823 , HOH C:4000 , HOH C:4062BINDING SITE FOR RESIDUE CD C 825
13BC4SOFTWAREHOH C:3011 , HOH C:3012 , HOH C:5085 , CYS D:990 , HOH D:8000BINDING SITE FOR RESIDUE CD D 1122
14BC5SOFTWAREHOH C:3011 , ASP D:939 , HOH D:2107 , HOH D:2135 , HOH D:3013 , HOH D:7091BINDING SITE FOR RESIDUE CD D 1123
15BC6SOFTWAREGLU B:391 , CYS D:990 , HOH D:2107 , HOH D:2135 , HOH D:2156 , HOH D:4092BINDING SITE FOR RESIDUE CD B 1124

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:87 -A:98
2B:387 -B:398
3C:687 -C:698
4D:987 -D:998

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1FNU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1FNU)

(-) PROSITE Motifs  (2, 8)

Asymmetric/Biological Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1STAPH_STREP_TOXIN_1PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1.SPEA_BPT12130-139
 
 
 		  4A:100-109
B:400-409
C:700-709
D:1000-1009
SPEA_STRPY130-139
 
 
 		  4A:100-109
B:400-409
C:700-709
D:1000-1009
2STAPH_STREP_TOXIN_2PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2.SPEA_BPT12167-190
 
 
 		  4A:137-160
B:437-460
C:737-760
D:1037-1060

(-) Exons   (0, 0)

(no "Exon" information available for 1FNU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_BPT12 | P0DJY8 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:221
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 
          SPEA_BPT12     31 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  251
               SCOP domains d1fnua1 A:1-107 Streptococcal pyrogenic exotoxin A1                                                        d1fnua2 A:108-221 Streptococcal pyrogenic exotoxin A1                                                              SCOP domains
               CATH domains 1fnuA02 A:1-26,A:109-220  1fnuA01 A:27-106  [code=2.40.50.110, no name defined]                           --1fnuA02 A:1-26,A:109-220  [code=3.10.20.120, no name defined]                                                   - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh.hhhhh..hhhhhhhhhh..eeeeeee........eeee........eeeee..hhhhhhhhhh.eeeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhhh..........eeeeeeee.....eeee.......hhhhhhhhhh...eee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     ------------------------------------------------------------- PROSITE (1)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu A    1 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK  221
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220 


Chain A from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_STRPY | P0DJY7 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:221
                                                                                                                                                                      170                                                                                
                                                                                                                                                                    169 |                                                                                
                                    40        50        60        70        80        90       100       110       120       130       140       150       160        |-|      179       189       199       209       219       229       239       249 
          SPEA_STRPY     31 STRPKPSQLQRSNLVKTFKIYIFFMRVTLVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACLYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIEQIKNG-NCSRISYTVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  250
               SCOP domains d1fnua1 A:1-107 Streptococcal pyrogenic exotoxin A1                                                        d1fnua2 A:108-221 Streptococcal pyrogenic exotoxin A1                                                              SCOP domains
               CATH domains 1fnuA02 A:1-26,A:109-220  1fnuA01 A:27-106  [code=2.40.50.110, no name defined]                           --1fnuA02 A:1-26,A:109-220  [code=3.10.20.120, no name defined]                                                   - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh.hhhhh..hhhhhhhhhh..eeeeeee........eeee........eeeee..hhhhhhhhhh.eeeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhhh..........eeeeeeee.....eeee.......hhhhhhhhhh...eee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu A    1 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK  221
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220 


Chain B from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_BPT12 | P0DJY8 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:221
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 
          SPEA_BPT12     31 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  251
               SCOP domains d1fnub1 B:301-407 Streptococcal pyrogenic exotoxin A1                                                      d1fnub2 B:408-521 Streptococcal pyrogenic exotoxin A1                                                              SCOP domains
               CATH domains 1fnuB02                   1fnuB01 B:327-406  [code=2.40.50.110, no name defined]                          --1fnuB02 B:301-326,B:409-520  [code=3.10.20.120, no name defined]                                                - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhh..hhhhhhhhhh..eeeeee.........eeee........eeeee..hhhhhhhhhh..eeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhh.........eeeeeeeee......eeee.......hhhhhhhhhh...eee....eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     ------------------------------------------------------------- PROSITE (1)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu B  301 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK  521
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520 


Chain B from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_STRPY | P0DJY7 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:221
                                                                                                                                                                      170                                                                                
                                                                                                                                                                    169 |                                                                                
                                    40        50        60        70        80        90       100       110       120       130       140       150       160        |-|      179       189       199       209       219       229       239       249 
          SPEA_STRPY     31 STRPKPSQLQRSNLVKTFKIYIFFMRVTLVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACLYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIEQIKNG-NCSRISYTVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  250
               SCOP domains d1fnub1 B:301-407 Streptococcal pyrogenic exotoxin A1                                                      d1fnub2 B:408-521 Streptococcal pyrogenic exotoxin A1                                                              SCOP domains
               CATH domains 1fnuB02                   1fnuB01 B:327-406  [code=2.40.50.110, no name defined]                          --1fnuB02 B:301-326,B:409-520  [code=3.10.20.120, no name defined]                                                - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhh..hhhhhhhhhh..eeeeee.........eeee........eeeee..hhhhhhhhhh..eeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhh.........eeeeeeeee......eeee.......hhhhhhhhhh...eee....eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu B  301 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK  521
                                   310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520 


Chain C from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_BPT12 | P0DJY8 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:221
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 
          SPEA_BPT12     31 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  251
               SCOP domains d1fnuc1 C:601-707 Streptococcal pyrogenic exotoxin A1                                                      d1fnuc2 C:708-821 Streptococcal pyrogenic exotoxin A1                                                              SCOP domains
               CATH domains 1fnuC02                   1fnuC01 C:627-706  [code=2.40.50.110, no name defined]                          --1fnuC02 C:601-626,C:709-820  [code=3.10.20.120, no name defined]                                                - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh.hhhhh..hhhhhhhhhh..eeeeee.........eeee........eeeee..hhhhhhhhhh..eeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhhh..........eeeeeee......eeee.......hhhhhhhhhh...eee....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     ------------------------------------------------------------- PROSITE (1)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu C  601 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK  821
                                   610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820 


Chain C from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_STRPY | P0DJY7 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:221
                                                                                                                                                                      170                                                                                
                                                                                                                                                                    169 |                                                                                
                                    40        50        60        70        80        90       100       110       120       130       140       150       160        |-|      179       189       199       209       219       229       239       249 
          SPEA_STRPY     31 STRPKPSQLQRSNLVKTFKIYIFFMRVTLVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACLYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIEQIKNG-NCSRISYTVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  250
               SCOP domains d1fnuc1 C:601-707 Streptococcal pyrogenic exotoxin A1                                                      d1fnuc2 C:708-821 Streptococcal pyrogenic exotoxin A1                                                              SCOP domains
               CATH domains 1fnuC02                   1fnuC01 C:627-706  [code=2.40.50.110, no name defined]                          --1fnuC02 C:601-626,C:709-820  [code=3.10.20.120, no name defined]                                                - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh.hhhhh..hhhhhhhhhh..eeeeee.........eeee........eeeee..hhhhhhhhhh..eeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhhh..........eeeeeee......eeee.......hhhhhhhhhh...eee....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu C  601 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK  821
                                   610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820 


Chain D from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_BPT12 | P0DJY8 from UniProtKB/Swiss-Prot  Length:251

    Alignment length:221
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 
          SPEA_BPT12     31 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  251
               SCOP domains d1fnud1 D:901-1007 Streptococcal pyrogenic exotoxin A1                                                     d1fnud2 D:1008-1121 Streptococcal pyrogenic exotoxin A1                                                            SCOP domains
               CATH domains 1fnuD02                   1fnuD01 D:927-1006  [code=2.40.50.110, no name defined]                         --1fnuD02 D:901-926,D:1009-1120  [code=3.10.20.120, no name defined]                                              - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh.hhhhh..hhhhhhhhhh..eeeeee.........eeee........eeeee..hhhhhhhhhh..eeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhhh..........eeeeee.......eeee.......hhhhhhhhhh...eee.....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     ------------------------------------------------------------- PROSITE (1)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu D  901 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK 1121
                                   910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120 


Chain D from PDB  Type:PROTEIN  Length:221
 aligned with SPEA_STRPY | P0DJY7 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:221
                                                                                                                                                                      170                                                                                
                                                                                                                                                                    169 |                                                                                
                                    40        50        60        70        80        90       100       110       120       130       140       150       160        |-|      179       189       199       209       219       229       239       249 
          SPEA_STRPY     31 STRPKPSQLQRSNLVKTFKIYIFFMRVTLVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACLYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIEQIKNG-NCSRISYTVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK  250
               SCOP domains d1fnud1 D:901-1007 Streptococcal pyrogenic exotoxin A1                                                     d1fnud2 D:1008-1121 Streptococcal pyrogenic exotoxin A1                                                            SCOP domains
               CATH domains 1fnuD02                   1fnuD01 D:927-1006  [code=2.40.50.110, no name defined]                         --1fnuD02 D:901-926,D:1009-1120  [code=3.10.20.120, no name defined]                                              - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh.hhhhh..hhhhhhhhhh..eeeeee.........eeee........eeeee..hhhhhhhhhh..eeeee...............eeeee..eee....eeeeeeeeeeeeee..eeeeeeeeeeee.eeehhhhhhhhhhhhhhhhh..........eeeeee.......eeee.......hhhhhhhhhh...eee.....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------STAPH_STRE---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1fnu D  901 QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK 1121
                                   910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1FNU)

(-) Gene Ontology  (2, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (SPEA_BPT12 | P0DJY8)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain A,B,C,D   (SPEA_STRPY | P0DJY7)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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  1fnu
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  SPEA_STRPY | P0DJY7
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPEA_BPT12 | P0DJY8: 1b1z 1fnv 1fnw 1ha5 1l0x 1l0y 1uup
        SPEA_STRPY | P0DJY7: 1b1z 1fnv 1fnw 1ha5 1l0x 1l0y 1uup

(-) Related Entries Specified in the PDB File

1fnu OTHER CRYSTAL FORM
1fnv OTHER CRYSTAL FORM