1EIN - JenaLib

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Biological Unit 3 (Jmol Viewer)

Title :   THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

Authors :   A. M. Brozozowski, H. Savage

Date :   26 Feb 00 (Deposition) - 20 Dec 00 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.00

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Alpha-Beta Structure, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. M. Brzozowski, H. Savage, C. S. Verma, J. P. Turkenburg, D. M. Lawson, A. Svendsen, S. Patkar
Structural Origins Of The Interfacial Activation In Thermomyces (Humicola) Lanuginosa Lipase.
Biochemistry V. 39 15071 2000
PubMed-ID: 11106485 | Reference-DOI: 10.1021/BI0013905
(for further references see the PDB file header)

Molecule 1 - LIPASE
	Chains	:	A, B, C
	EC Number	:	3.1.1.3
	Organism Scientific	:	THERMOMYCES LANUGINOSUS
	Organism Taxid	:	5541

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 3)

No.	Name	Count	Type	Full Name
1	PLC	3	Ligand/Ion	DIUNDECYL PHOSPHATIDYL CHOLINE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	PLC	1	Ligand/Ion	DIUNDECYL PHOSPHATIDYL CHOLINE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	PLC	1	Ligand/Ion	DIUNDECYL PHOSPHATIDYL CHOLINE

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	PLC	1	Ligand/Ion	DIUNDECYL PHOSPHATIDYL CHOLINE

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	SER A:83 , ARG A:84 , TRP A:89 , ASN A:92 , SER A:146 , VAL A:203 , ILE A:255 , PLC B:701 , TRP C:89 , PLC C:801	BINDING SITE FOR RESIDUE PLC A 601
2	AC2	SOFTWARE	TRP A:89 , PLC A:601 , SER B:83 , ASN B:92 , VAL B:203 , ILE B:255 , ILE C:255 , PLC C:801	BINDING SITE FOR RESIDUE PLC B 701
3	AC3	SOFTWARE	ILE A:255 , PLC A:601 , TRP B:89 , PLC B:701 , ARG C:84 , ASN C:92 , VAL C:203 , ILE C:255	BINDING SITE FOR RESIDUE PLC C 801

Asymmetric Unit

No.	Residues
1	A:22	-	A:268
2	A:36	-	A:41
3	A:104	-	A:107
4	B:22	-	B:268
5	B:36	-	B:41
6	B:104	-	B:107
7	C:22	-	C:268
8	C:36	-	C:41
9	C:104	-	C:107

Asymmetric Unit

No.	Residues
1	Leu A:206	-	Pro A:207
2	Ser A:217	-	Pro A:218
3	Leu B:206	-	Pro B:207
4	Ser B:217	-	Pro B:218
5	Leu C:206	-	Pro C:207
6	Ser C:217	-	Pro C:218

(no "SAP(SNP)/Variant" information available for 1EIN)

Asymmetric Unit (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LIPASE_SER	PS00120	Lipases, serine active site.	LIP_THELA	162-171	3	A:140-149 B:140-149 C:140-149

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LIPASE_SER	PS00120	Lipases, serine active site.	LIP_THELA	162-171	1	A:140-149 - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LIPASE_SER	PS00120	Lipases, serine active site.	LIP_THELA	162-171	1	- B:140-149 -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LIPASE_SER	PS00120	Lipases, serine active site.	LIP_THELA	162-171	1	- - C:140-149

(no "Exon" information available for 1EIN)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:269
 aligned with LIP_THELA | O59952 from UniProtKB/Swiss-Prot  Length:291

    Alignment length:269
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282         
            LIP_THELA    23 EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEGIDATGGNNQPNIPDIPAHLWYFGLIGTCL 291
               SCOP domains d1eina_ A: Triacylglycerol lipase                                                                                                                                                                                                                                             SCOP domains
               CATH domains 1einA00 A:1-269  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhh.eeeeeeeeee....eeeeeeee....eeeeee....hhhhhhhh....eee........eeehhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhh......eeeee......hhhhhhhhhhh....eeeeee...hhhhh.hhhhh......eeee............eeee................hhhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------LIPASE_SER------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ein A   1 EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEGIDATGGNNQPNIPDIPAHLWYFGLIGTCL 269
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260

Chain B from PDB  Type:PROTEIN  Length:269
 aligned with LIP_THELA | O59952 from UniProtKB/Swiss-Prot  Length:291

    Alignment length:269
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282         
            LIP_THELA    23 EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEGIDATGGNNQPNIPDIPAHLWYFGLIGTCL 291
               SCOP domains d1einb_ B: Triacylglycerol lipase                                                                                                                                                                                                                                             SCOP domains
               CATH domains 1einB00 B:1-269  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhh.eeeeeeeeee....eeeeeeee....eeeeee....hhhhhhhhh...eee........eee.hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhh......eeeee......hhhhhhhhhhh....eeeeee...hhhhh.hhhhh......eeee............eeee................hhhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------LIPASE_SER------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ein B   1 EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEGIDATGGNNQPNIPDIPAHLWYFGLIGTCL 269
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260

Chain C from PDB  Type:PROTEIN  Length:269
 aligned with LIP_THELA | O59952 from UniProtKB/Swiss-Prot  Length:291

    Alignment length:269
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282         
            LIP_THELA    23 EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEGIDATGGNNQPNIPDIPAHLWYFGLIGTCL 291
               SCOP domains d1einc_ C: Triacylglycerol lipase                                                                                                                                                                                                                                             SCOP domains
               CATH domains 1einC00 C:1-269  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhh.eeeeeeeeee....eeeeeeee....eeeeee....hhhhhhhhhh..eee........eee.hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhh.....eeeeee......hhhhhhhhhhh....eeeeee...hhhhh.hhhhh......eeee........hhh.eeee................hhhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------LIPASE_SER------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ein C   1 EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEGIDATGGNNQPNIPDIPAHLWYFGLIGTCL 269
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: alpha/beta-Hydrolases (971)

Superfamily: alpha/beta-Hydrolases (971)

Family: Fungal lipases (53)

Protein domain: Triacylglycerol lipase (29)

Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541] (17)

1a	d1eina_	A:
1b	d1einb_	B:
1c	d1einc_	C:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.1820, no name defined] (692)

Thermomyces lanuginosus. Organism_taxid: 5541 (7)

1a	1einA00	A:1-269
1b	1einB00	B:1-269
1c	1einC00	C:1-269

(no "Pfam Domain" information available for 1EIN)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (LIP_THELA | O59952)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0004806	triglyceride lipase activity	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.
biological process
	GO:0016042	lipid catabolic process	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

Asymmetric Unit
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Description

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Ligands, Modified Residues, Ions (1, 3)

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SS Bonds (9, 9)

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