Chain A from PDB Type:PROTEIN Length:226
aligned with CONA_CANBR | P55915 from UniProtKB/Swiss-Prot Length:237
Alignment length:237
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
CONA_CANBR 1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTEGNLRLTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
SCOP domains d1dq4a_ A: Con canavalin A SCOP domains
CATH domains 1dq4A00 A:1-23 7 [code=2.60.120.200, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee....-----....eeeeee......eeee.......eeeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeeeee.......eeeeeeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee....------....eeeeee...ee.....eeeeeeeeeeeee.........eeeeeeeee.........hhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----LECTIN_-------------------------------------------------------------------------LECTIN_LEG----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dq4 A 1 ADTIVAVELDTYPN-----PSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRV------QGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
10 | 20 30 40 50 60 70 80 90 100 110 120 130 140 150 |- | 170 180 190 200 210 220 230
14 20 159 166
Chain A from PDB Type:PROTEIN Length:226
aligned with CONA_CANEN | P02866 from UniProtKB/Swiss-Prot Length:290
Alignment length:233
1
- - - - - - - - | 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145
CONA_CANEN - -------------------------------------------------------------------------------------MAISKKSSLFLPIFTFITMFLMVVNKVSSSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 148
SCOP domains d1dq4a_ A: Concanavalin A SCOP domains
CATH domains 1dq4A00 A:1-237 [code=2.60.120.200, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee........eeeeee......eeee.......eeeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeeeee.......eeee-eeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee....------....eeeeee...ee.....eeeeeeeeeeeee.........eeeeeeeee.........hhhhh....... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dq4 A 1 ADTIVAVELDTYPNPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILS-WSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRV------QGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
10 || 25 35 45 55 65 75 85 95 105 | | 114 124 134 144 154 | - | 174 184 194 204 214 224 234
14| 108 | 159 166
20 109
Chain B from PDB Type:PROTEIN Length:223
aligned with CONA_CANBR | P55915 from UniProtKB/Swiss-Prot Length:237
Alignment length:237
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
CONA_CANBR 1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTEGNLRLTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
SCOP domains d1dq4b_ B: Co ncanavalin A SCOP domains
CATH domains 1dq4B00 B:1-2 37 [code=2.60.120.200, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee...------....eeeeee......eeee.......eeeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeeeee.......eeeeeeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee....--------..eeeeee...ee.....eeeeeeeeeeeee.........eeeeeeeee.........hhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----LECTIN_-------------------------------------------------------------------------LECTIN_LEG----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dq4 B 1 ADTIVAVELDTYP------PSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRV--------SSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
10 | 20 30 40 50 60 70 80 90 100 110 120 130 140 150 |- 170 180 190 200 210 220 230
13 20 159 168
Chain B from PDB Type:PROTEIN Length:223
aligned with CONA_CANEN | P02866 from UniProtKB/Swiss-Prot Length:290
Alignment length:232
1
- - - - - - - - | 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146
CONA_CANEN - ------------------------------------------------------------------------------------MAISKKSSLFLPIFTFITMFLMVVNKVSSSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 148
SCOP domains d1dq4b_ B: Concanavalin A SCOP domains
CATH domains 1dq4B00 B:1-237 [code=2.60.120.200, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee.......eeeeee......eeee.......eeeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeeeee.......eeee-eeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee....--------..eeeeee...ee.....eeeeeeeeeeeee.........eeeeeeeee.........hhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dq4 B 1 ADTIVAVELDTYPPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILS-WSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRV--------SSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
10 || 26 36 46 56 66 76 86 96 106 | | 115 125 135 145 155 | - | 175 185 195 205 215 225 235
13| 108 | 159 168
20 109
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |