Chain A from PDB Type:PROTEIN Length:288
aligned with ROB_ECOLI | P0ACI0 from UniProtKB/Swiss-Prot Length:289
Alignment length:292
289
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 | -
ROB_ECOLI 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR----- -
SCOP domains d1d5ya1 A:3-56 d1d5ya2 A:57-121 Rob transcription factor, N-terminal domain d1d5ya3 A:122-294 Rob transcription factor, C-terminal domain SCOP domains
CATH domains 1d5yA01 A:3-55 Homeodomain-like 1d5yA02 A:56-121 Homeodomain-like 1d5yA03 A:122-294 Multidrug-efflux Transporter 1 Regulator Bmrr; Chain CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.......hhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh..ee.................eeeeee..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeeee.......eeeeeeeeeehhhhhhhh...eeeee..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..ee....eeeee.hhhh----....eeeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -----HTH_ARAC_FAMILY_2 PDB: A:8-106 UniProt: 8-106 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------HTH_ARAC_FAMILY_1 PDB: A:55-100 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1d5y A 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAED----DRPINLRCELLIPIRRKLAAA 294
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 | - | 282 292
269 274
Chain B from PDB Type:PROTEIN Length:288
aligned with ROB_ECOLI | P0ACI0 from UniProtKB/Swiss-Prot Length:289
Alignment length:292
289
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 | -
ROB_ECOLI 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR----- -
SCOP domains d1d5yb1 B:3-56 d1d5yb2 B:57-121 Rob transcription factor, N-terminal domain d1d5yb3 B:122-294 Rob transcription factor, C-terminal domain SCOP domains
CATH domains 1d5yB01 B:3-55 Homeodomain-like 1d5yB02 B:56-121 Homeodomain-like 1d5yB03 B:122-293 Multidrug-efflux Transporter 1 Regulator Bmrr; Chain - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.................hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh..ee................eeeeeee..eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhh........eeeeeeeee.......eeeeeeeeee...........eeeee..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..ee....eeeee.hhhh----....eeeeeeeee........ Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -----HTH_ARAC_FAMILY_2 PDB: B:8-106 UniProt: 8-106 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------HTH_ARAC_FAMILY_1 PDB: B:55-100 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1d5y B 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAED----DRPINLRCELLIPIRRKLAAA 294
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 | - | 282 292
269 274
Chain C from PDB Type:PROTEIN Length:288
aligned with ROB_ECOLI | P0ACI0 from UniProtKB/Swiss-Prot Length:289
Alignment length:292
289
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 | -
ROB_ECOLI 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR----- -
SCOP domains d1d5yc1 C:3-56 d1d5yc2 C:57-121 Rob transcription factor, N-terminal domain d1d5yc3 C:122-294 Rob transcription factor, C-terminal domain SCOP domains
CATH domains 1d5yC01 C:3-55 Homeodomain-like 1d5yC02 C:56-121 Homeodomain-like 1d5yC03 C:122-293 Multidrug-efflux Transporter 1 Regulator Bmrr; Chain - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.......hhhhh...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh..ee...................eeee..eeeeeeeee......hhhhhhhhhhhhhhhhhh.........eeeeeeeee.......eeeeeeeeee...........eeeee..eeeeeeeeeee..hhhhhhhhhhhhhhhhhh.ee....eeeee.....----....eeeeeeeee........ Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -----HTH_ARAC_FAMILY_2 PDB: C:8-106 UniProt: 8-106 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------HTH_ARAC_FAMILY_1 PDB: C:55-100 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1d5y C 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAED----DRPINLRCELLIPIRRKLAAA 294
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 | - | 282 292
269 274
Chain D from PDB Type:PROTEIN Length:288
aligned with ROB_ECOLI | P0ACI0 from UniProtKB/Swiss-Prot Length:289
Alignment length:292
289
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 | -
ROB_ECOLI 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR----- -
SCOP domains d1d5yd1 D:3-56 d1d5yd2 D:57-121 Rob transcription factor, N-terminal domain d1d5yd3 D:122-294 Rob transcription factor, C-terminal domain SCOP domains
CATH domains 1d5yD01 D:3-55 Homeodomain-like 1d5yD02 D:56-121 Homeodomain-like 1d5yD03 D:122-293 Multidrug-efflux Transporter 1 Regulator Bmrr; Chain - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhh..................hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh....................eeeeeee..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh........eeeeeeeee.......eeeeeeeeeehhhhhhhh...eeeee..eeeeeeeeeee..hhhhhhhhhhhhhhhhh........eeeee.hhhh----....eeeeeeeee........ Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -----HTH_ARAC_FAMILY_2 PDB: D:8-106 UniProt: 8-106 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------HTH_ARAC_FAMILY_1 PDB: D:55-100 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1d5y D 3 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAED----DRPINLRCELLIPIRRKLAAA 294
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 | - | 282 292
269 274
Chain M from PDB Type:DNA Length:21
1d5y M 1 TGACAGCACTGAATGTCAAAG 21
10 20
Chain N from PDB Type:DNA Length:21
1d5y N 1 ACTTTGACATTCAGTGCTGTC 21
10 20
Chain O from PDB Type:DNA Length:21
1d5y O 1 TGACAGCACTGAATGTCAAAG 21
10 20
Chain P from PDB Type:DNA Length:21
1d5y P 1 ACTTTGACATTCAGTGCTGTC 21
10 20
Legend: |
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→ Mismatch |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |