1CF1 - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Title :   ARRESTIN FROM BOVINE ROD OUTER SEGMENTS

Authors :   J. A. Hirsch, C. Schubert, V. V. Gurevich, P. B. Sigler

Date :   23 Mar 99 (Deposition) - 16 Apr 99 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: B (1x),D (1x)

Keywords :   Visual Arrestin, Desensitisation Of The Visual Transduction Cascade, Binding To Acticated And Phosphorylated Rhodopsin, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. A. Hirsch, C. Schubert, V. V. Gurevich, P. B. Sigler
The 2. 8 A Crystal Structure Of Visual Arrestin: A Model For Arrestin'S Regulation.
Cell(Cambridge, Mass. ) V. 97 257 1999
PubMed-ID: 10219246 | Reference-DOI: 10.1016/S0092-8674(00)80735-7
(for further references see the PDB file header)

Molecule 1 - PROTEIN (ARRESTIN)
	Cell	:	ROD OUTER SEGMENTS
	Cellular Location	:	CYTOPLASM
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PTRC
	Expression System Strain	:	ER2508
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Organ	:	EYE
	Organism Common	:	CATTLE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Synonym	:	RETINAL S-ANTIGEN, 48 KD PROTEIN
	Tissue	:	RETINA

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:		B (1x)		D (1x)

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1CF1)

(no "Site" information available for 1CF1)

(no "SS Bond" information available for 1CF1)

Asymmetric Unit

No.	Residues
1	Phe A:91	-	Pro A:92
2	Phe B:91	-	Pro B:92
3	Phe C:91	-	Pro C:92
4	Phe D:91	-	Pro D:92

(no "SAP(SNP)/Variant" information available for 1CF1)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARRESTINS	PS00295	Arrestins signature.	ARRS_BOVIN	65-83	4	A:65-83 B:65-83 C:65-83 D:65-83

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARRESTINS	PS00295	Arrestins signature.	ARRS_BOVIN	65-83	1	A:65-83 - - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARRESTINS	PS00295	Arrestins signature.	ARRS_BOVIN	65-83	1	- B:65-83 - -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARRESTINS	PS00295	Arrestins signature.	ARRS_BOVIN	65-83	1	- - C:65-83 -

Biological Unit 4 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARRESTINS	PS00295	Arrestins signature.	ARRS_BOVIN	65-83	1	- - - D:65-83

Biological Unit 5 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARRESTINS	PS00295	Arrestins signature.	ARRS_BOVIN	65-83	2	- B:65-83 - D:65-83

Asymmetric Unit (15, 59)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000028633	1	ENSBTAE00000264532	chr3:120323559-120323664	106	ARRS_BOVIN	-	0	0	-	-
1.2	ENSBTAT00000028633	2	ENSBTAE00000264531	chr3:120324357-120324487	131	ARRS_BOVIN	1-25	25	4	A:10-25 B:9-25 C:7-25 D:9-25	16 17 19 17
1.3	ENSBTAT00000028633	3	ENSBTAE00000233945	chr3:120328854-120328914	61	ARRS_BOVIN	26-46	21	4	A:26-46 B:26-46 C:26-46 D:26-46	21 21 21 21
1.4	ENSBTAT00000028633	4	ENSBTAE00000233946	chr3:120331269-120331313	45	ARRS_BOVIN	46-61	16	4	A:46-61 B:46-61 C:46-61 D:46-61	16 16 16 16
1.5	ENSBTAT00000028633	5	ENSBTAE00000233947	chr3:120333403-120333596	194	ARRS_BOVIN	61-125	65	4	A:61-125 B:61-125 (gaps) C:61-125 D:61-125	65 65 65 65
1.6	ENSBTAT00000028633	6	ENSBTAE00000233948	chr3:120334857-120334916	60	ARRS_BOVIN	126-145	20	4	A:126-145 B:126-145 C:126-145 D:126-145	20 20 20 20
1.7	ENSBTAT00000028633	7	ENSBTAE00000264537	chr3:120336535-120336611	77	ARRS_BOVIN	146-171	26	4	A:146-171 B:146-171 C:146-171 D:146-171	26 26 26 26
1.8	ENSBTAT00000028633	8	ENSBTAE00000233950	chr3:120337650-120337785	136	ARRS_BOVIN	171-216	46	4	A:171-216 B:171-216 C:171-216 D:171-216	46 46 46 46
1.9	ENSBTAT00000028633	9	ENSBTAE00000233951	chr3:120338752-120338836	85	ARRS_BOVIN	217-245	29	4	A:217-245 B:217-245 C:217-245 D:217-245	29 29 29 29
1.10	ENSBTAT00000028633	10	ENSBTAE00000233952	chr3:120340732-120340804	73	ARRS_BOVIN	245-269	25	4	A:245-269 B:245-269 C:245-269 D:245-269	25 25 25 25
1.11	ENSBTAT00000028633	11	ENSBTAE00000233953	chr3:120343177-120343314	138	ARRS_BOVIN	269-315	47	4	A:269-315 B:269-315 C:269-315 D:269-315	47 47 47 47
1.12	ENSBTAT00000028633	12	ENSBTAE00000233954	chr3:120345389-120345466	78	ARRS_BOVIN	315-341	27	4	A:315-341 B:315-341 C:315-341 D:315-341	27 27 27 27
1.13	ENSBTAT00000028633	13	ENSBTAE00000423082	chr3:120348241-120348264	24	ARRS_BOVIN	341-349	9	4	A:341-349 B:341-349 C:341-349 D:341-349	9 9 9 9
1.14	ENSBTAT00000028633	14	ENSBTAE00000264530	chr3:120350100-120350155	56	ARRS_BOVIN	349-368	20	4	A:349-362 B:349-362 C:349-364 D:349-361	14 14 16 13
1.15	ENSBTAT00000028633	15	ENSBTAE00000392917	chr3:120352804-120352819	16	ARRS_BOVIN	368-373	6	3	- B:372-373 C:372-373 D:372-373	- 2 2 2
1.17	ENSBTAT00000028633	17	ENSBTAE00000233957	chr3:120353845-120353953	109	ARRS_BOVIN	373-408	36	4	A:374-393 B:373-385 C:373-393 D:373-386	20 13 21 14

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:373
 aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot  Length:404

    Alignment length:384
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389    
           ARRS_BOVIN    10 HVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNLKDAGEYKE 393
               SCOP domains d1cf1a1 A:10-182 Arrestin                                                                                                                                                    d1cf1a2 A:183-393 Arrestin                                                                                                                                                                                          SCOP domains
               CATH domains 1cf1A01 A:10-182  [code=2.60.40.840, no name defined]                                                                                                                        ----1cf1A02 A:187-375  [code=2.60.40.640, no name defined]                                                                                                                                       ------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.....eeeee...eeee.......eeeeeee........eeeeeeeeeeee...........eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee.hhhhh........eeeeeeeeee...........eeeeeeeee..eeeeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee.........eeeeeeeeeeee......-----------..eeee.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------ARRESTINS          ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2        Exon 1.3  PDB: A:26-4--------------Exon 1.5  PDB: A:61-125 UniProt: 61-125                          Exon 1.6            Exon 1.7  PDB: A:146-171  -------------------------------------------------------------------------Exon 1.10  PDB: A:245-269---------------------------------------------Exon 1.12  PDB: A:315-341  -------Exon 1.14           ----Exon 1.17             Transcript 1 (1)
           Transcript 1 (2) ------------------------------------Exon 1.4        -------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: A:171-216 UniProt: 171-216     Exon 1.9  PDB: A:217-245     -----------------------Exon 1.11  PDB: A:269-315 UniProt: 269-315     -------------------------Exon 1.13------------------1.15  -------------------- Transcript 1 (2)
                 1cf1 A  10 HVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPED-----------NFVFEEFARQNLKDAGEYKE 393
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359  |      -    |  379       389    
                                                                                                                                                                                                                                                                                                                                                                                          362         374

Chain B from PDB  Type:PROTEIN  Length:360
 aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot  Length:404

    Alignment length:377
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       
           ARRS_BOVIN     9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNL 385
               SCOP domains d1cf1b1 B:9-182 Arrestin                                                                                                                                                      d1cf1b2 B:183-385 Arrestin                                                                                                                                                                                  SCOP domains
               CATH domains -1cf1B01 B:10-182  [code=2.60.40.840, no name defined]                                                                                                                        --1cf1B02 B:185-375  [code=2.60.40.640, no name defined]                                                                                                                                         ---------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....eeeee...eeeee......eeeeeee.hhhh...eeeeeeeeeeee..--------.eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee...........hhheeeeeeeeeee.........eeeeee........eeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee...........eeeeeeeeee......---------...eeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------ARRESTINS          -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2         Exon 1.3  PDB: B:26-4--------------Exon 1.5  PDB: B:61-125 (gaps) UniProt: 61-125                   Exon 1.6            Exon 1.7  PDB: B:146-171  -------------------------------------------------------------------------Exon 1.10  PDB: B:245-269---------------------------------------------Exon 1.12  PDB: B:315-341  -------Exon 1.14           ----Exon 1.17     Transcript 1 (1)
           Transcript 1 (2) -------------------------------------Exon 1.4        -------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: B:171-216 UniProt: 171-216     Exon 1.9  PDB: B:217-245     -----------------------Exon 1.11  PDB: B:269-315 UniProt: 269-315     -------------------------Exon 1.13------------------1.15  ------------ Transcript 1 (2)
                 1cf1 B   9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQ--------SFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPED---------DENFVFEEFARQNL 385
                                    18        28        38        48        58        68|       78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358   |     -   |   378       
                                                                                       69       78                                                                                                                                                                                                                                                                                         362       372

Chain C from PDB  Type:PROTEIN  Length:380
 aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot  Length:404

    Alignment length:387
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       
           ARRS_BOVIN     7 APNHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNLKDAGEYKE 393
               SCOP domains d1cf1c1 C:7-182 Arrestin                                                                                                                                                        d1cf1c2 C:183-393 Arrestin                                                                                                                                                                                          SCOP domains
               CATH domains ---1cf1C01 C:10-182  [code=2.60.40.840, no name defined]                                                                                                                        ----1cf1C02 C:187-375  [code=2.60.40.640, no name defined]                                                                                                                                       ------------------ CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee.....eeeee...eeee.......eeeeeee........eeeeeeeeeeee...........eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee.hhhhh........eeeee.eeee...........eeeeeeeee..eeeeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee.........eeeeeeeeeeee........-------...eeeee.............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------ARRESTINS          ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2           Exon 1.3  PDB: C:26-4--------------Exon 1.5  PDB: C:61-125 UniProt: 61-125                          Exon 1.6            Exon 1.7  PDB: C:146-171  -------------------------------------------------------------------------Exon 1.10  PDB: C:245-269---------------------------------------------Exon 1.12  PDB: C:315-341  -------Exon 1.14           ----Exon 1.17             Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.4        -------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: C:171-216 UniProt: 171-216     Exon 1.9  PDB: C:217-245     -----------------------Exon 1.11  PDB: C:269-315 UniProt: 269-315     -------------------------Exon 1.13------------------1.15  -------------------- Transcript 1 (2)
                 1cf1 C   7 APNHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPD-------DENFVFEEFARQNLKDAGEYKE 393
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       | -     | 376       386       
                                                                                                                                                                                                                                                                                                                                                                                               364     372

Chain D from PDB  Type:PROTEIN  Length:368
 aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot  Length:404

    Alignment length:378
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378        
           ARRS_BOVIN     9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNLK 386
               SCOP domains d1cf1d1 D:9-182 Arrestin                                                                                                                                                      d1cf1d2 D:183-386 Arrestin                                                                                                                                                                                   SCOP domains
               CATH domains -1cf1D01 D:10-182  [code=2.60.40.840, no name defined]                                                                                                                        --1cf1D02 D:185-375  [code=2.60.40.640, no name defined]                                                                                                                                         ----------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....eeeee...eeeee......eeeeeee.hhhh...eeeeeeeeeeee...........eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee...........hhheeeeeeeeeee.........eeeeee........eeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee...........eeeeeeeeee.....----------....eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------ARRESTINS          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2         Exon 1.3  PDB: D:26-4--------------Exon 1.5  PDB: D:61-125 UniProt: 61-125                          Exon 1.6            Exon 1.7  PDB: D:146-171  -------------------------------------------------------------------------Exon 1.10  PDB: D:245-269---------------------------------------------Exon 1.12  PDB: D:315-341  -------Exon 1.14           ----Exon 1.17      Transcript 1 (1)
           Transcript 1 (2) -------------------------------------Exon 1.4        -------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: D:171-216 UniProt: 171-216     Exon 1.9  PDB: D:217-245     -----------------------Exon 1.11  PDB: D:269-315 UniProt: 269-315     -------------------------Exon 1.13------------------1.15  ------------- Transcript 1 (2)
                 1cf1 D   9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPE----------DENFVFEEFARQNLK 386
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358  |      -   |   378        
                                                                                                                                                                                                                                                                                                                                                                                          361        372

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Immunoglobulin-like beta-sandwich (7299)

Superfamily: E set domains (509)

Family: Arrestin/Vps26-like (13)

Protein domain: Arrestin (9)

Cow (Bos taurus), visual arrestin [TaxId: 9913] (2)

1a	d1cf1a1	A:10-182
1b	d1cf1a2	A:183-393
1c	d1cf1b1	B:9-182
1d	d1cf1b2	B:183-385
1e	d1cf1c1	C:7-182
1f	d1cf1c2	C:183-393
1g	d1cf1d1	D:9-182
1h	d1cf1d2	D:183-386

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Immunoglobulin-like (3897)

Homologous Superfamily: [code=2.60.40.640, no name defined] (10)

Cattle (Bos taurus) (7)

1a	1cf1A02	A:187-375
1b	1cf1C02	C:187-375
1c	1cf1D02	D:185-375
1d	1cf1B02	B:185-375

Homologous Superfamily: [code=2.60.40.840, no name defined] (10)

Cattle (Bos taurus) (7)

2a	1cf1B01	B:10-182
2b	1cf1D01	D:10-182
2c	1cf1A01	A:10-182
2d	1cf1C01	C:10-182

(no "Pfam Domain" information available for 1CF1)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (ARRS_BOVIN | P08168)

molecular function
	GO:0002046	opsin binding	Interacting selectively and non-covalently with an opsin, any of a group of hydrophobic, integral membrane glycoproteins located primarily in the disc membrane of rods or cones, involved in photoreception.
	GO:0051219	phosphoprotein binding	Interacting selectively and non-covalently with a phosphorylated protein.
biological process
	GO:0022400	regulation of rhodopsin mediated signaling pathway	Any process that modulates the frequency, rate or extent of rhodopsin-mediated signaling.
	GO:0050896	response to stimulus	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism.
	GO:0007165	signal transduction	The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
	GO:0007601	visual perception	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0001917	photoreceptor inner segment	The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs.
	GO:0001750	photoreceptor outer segment	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1cf1)

	Sites
(no "Sites" information available for 1cf1)

	Cis Peptide Bonds
		Phe A:91 - Pro A:92	[ RasMol ]
		Phe B:91 - Pro B:92	[ RasMol ]
		Phe C:91 - Pro C:92	[ RasMol ]
		Phe D:91 - Pro D:92	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]
		Biological Unit 5	[ Jena3D ]

Jmol
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Prepi
	ribbon, secondary structure, chain-specific coloring [ mono GIF format \| stereo GIF format ]
	C alpha wire, chain-specific coloring [ mono GIF format \| stereo GIF format ]
	spacefill, chain-specific coloring [ mono GIF format \| stereo GIF format ]

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	1cf1
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	ARRS_BOVIN \| P08168
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		Protein-protein Interaction	:	DIP
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Access by UniProt ID/Accession number
	ARRS_BOVIN \| P08168
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	ARRS_BOVIN \| P08168	:	1ayr 1y6y 3ugu 3ugx 4j2q 4pxf 4zrg

(no "Related Entries Specified in the PDB File" available for 1CF1)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (15, 59)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (2, 8)

Pfam Domains (0, 0)

Gene Ontology (9, 9)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File