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(-) Description

Title :  EF-TU EF-TS COMPLEX FROM THERMUS THERMOPHILUS
 
Authors :  Y. Wang, Y. Jiang, M. Meyering-Voss, M. Sprinzl, P. B. Sigler
Date :  22 Apr 97  (Deposition) - 22 Oct 97  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Elongation Factor, Nucleotide Exchange, Gtp-Binding, Complex Of Two Elongation Factors (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Wang, Y. Jiang, M. Meyering-Voss, M. Sprinzl, P. B. Sigler
Crystal Structure Of The Ef-Tu. Ef-Ts Complex From Thermus Thermophilus.
Nat. Struct. Biol. V. 4 650 1997
PubMed-ID: 9253415  |  Reference-DOI: 10.1038/NSB0897-650
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ELONGATION FACTOR TU
    Chains: A, B, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: JM109
    Expression System Taxid: 562
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274
    Synonym: EF-TU
 
Molecule 2 - ELONGATION FACTOR TS
    Chains: C, D, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: JM109
    Expression System Taxid: 562
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274
    Synonym: EF-TS

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABCD    
Biological Unit 2 (1x):     EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1AIP)

(-) Sites  (0, 0)

(no "Site" information available for 1AIP)

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1C:190 -D:190
2G:190 -H:190

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1AIP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1AIP)

(-) PROSITE Motifs  (3, 12)

Asymmetric Unit (3, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_TS_1PS01126 Elongation factor Ts signature 1.EFTS_THET810-25
 
 
 		  4C:10-25
D:10-25
G:10-25
H:10-25
2G_TR_1PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature.EFTU1_THETH52-67
 
 
 		  4A:65-66
B:65-66
E:66-66
F:66-66
3EF_TS_2PS01127 Elongation factor Ts signature 2.EFTS_THET875-85
 
 
 		  4C:75-85
D:75-85
G:75-85
H:75-85
Biological Unit 1 (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_TS_1PS01126 Elongation factor Ts signature 1.EFTS_THET810-25
 
 
 		  2C:10-25
D:10-25
-
-
2G_TR_1PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature.EFTU1_THETH52-67
 
 
 		  2A:65-66
B:65-66
-
-
3EF_TS_2PS01127 Elongation factor Ts signature 2.EFTS_THET875-85
 
 
 		  2C:75-85
D:75-85
-
-
Biological Unit 2 (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_TS_1PS01126 Elongation factor Ts signature 1.EFTS_THET810-25
 
 
 		  2-
-
G:10-25
H:10-25
2G_TR_1PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature.EFTU1_THETH52-67
 
 
 		  2-
-
E:66-66
F:66-66
3EF_TS_2PS01127 Elongation factor Ts signature 2.EFTS_THET875-85
 
 
 		  2-
-
G:75-85
H:75-85

(-) Exons   (0, 0)

(no "Exon" information available for 1AIP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:373
 aligned with EFTU1_THETH | P60338 from UniProtKB/Swiss-Prot  Length:406

    Alignment length:397
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       
          EFTU1_THETH    10 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406
               SCOP domains d1aipa3 A:9-212 Elongation facto                        r Tu (EF-Tu), N-terminal (G) domain                                                                                                                 d1aipa1 A:213-312 Elongation factor Tu (EF-Tu), domain 2                                            d1aipa2 A:313-405 Elongation factor Tu (EF-Tu)                                                SCOP domains
               CATH domains 1aipA01 A:9-213 P-loop containin                        g nucleotide triphosphate hydrolases                                                                                                                 --1aipA02 A:216-307 Translation factors                                                       ---1aipA03 A:311-404 Translation factors                                                         - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee......hhhhhhhhhhhhh....------------------------....eee....eeeeee...hhhhhhhhhh......eeeeeee......hhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh........eee..hhhhhhhhhh.........hhhhhhhhhhhhhhhh............eee...eeee...eeeeeee..........eeeee......eeeeeeeee.............eeeeee............eee.....eee.eeeeeeee................eeeee.....eeeeee............eeeeeeee...eee....eeeeee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------G_TR_1          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip A   9 KPHVNVGTIGHVDHGKTTLTAALTYVTAAENP------------------------TAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 405
                                    18        28        38 |       -         -      | 68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       
                                                          40                       65                                                                                                                                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:373
 aligned with EFTU1_THETH | P60338 from UniProtKB/Swiss-Prot  Length:406

    Alignment length:397
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       
          EFTU1_THETH    10 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406
               SCOP domains d1aipb3 B:9-212 Elongation facto                        r Tu (EF-Tu), N-terminal (G) domain                                                                                                                 d1aipb1 B:213-312 Elongation factor Tu (EF-Tu), domain 2                                            d1aipb2 B:313-405 Elongation factor Tu (EF-Tu)                                                SCOP domains
               CATH domains 1aipB01 B:9-213 P-loop containin                        g nucleotide triphosphate hydrolases                                                                                                                 --1aipB02 B:216-346 Translation factors                                                                                              ---1aipB03 B:350-404 Translation factors                  - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee......hhhhhhhhhhhhh....------------------------...eeee....eeeeee...hhhhhhhhhh......eeeeeee......hhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh........eee..hhhhhhhhhh.........hhhhhhhhhhhhhhhh............eee...eee.....eeeeee..........eeeee......eeee...eee............eeeee.............eeee....eee.eeeeeeee................eeeee.....eeeeee............eeeeeeee...eee......eeee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------G_TR_1          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip B   9 KPHVNVGTIGHVDHGKTTLTAALTYVTAAENP------------------------TAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 405
                                    18        28        38 |       -         -      | 68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       
                                                          40                       65                                                                                                                                                                                                                                                                                                                                                    


Chain C from PDB  Type:PROTEIN  Length:195
 aligned with EFTS_THET8 | P43895 from UniProtKB/Swiss-Prot  Length:196

    Alignment length:195
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191     
           EFTS_THET8     2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
               SCOP domains d1aipc1 C:2-53                                      d1aipc2 C:54-196 Elongation factor Ts (EF-Ts), dimerisation domain                                                                              SCOP domains
               CATH domains 1aipC03 C:2-54                                       1aipC01 C:55-109,C:155-196                             1aipC02 C:110-154                            1aipC01 C:55-109,C:155-196                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh...hhhhhhhhhh....hhhhhhhhhhhhhhhhhhh......eeeeeeee.....eeeeeeeee..hhhh..hhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------EF_TS_1         -------------------------------------------------EF_TS_2    --------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip C   2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191     


Chain D from PDB  Type:PROTEIN  Length:195
 aligned with EFTS_THET8 | P43895 from UniProtKB/Swiss-Prot  Length:196

    Alignment length:195
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191     
           EFTS_THET8     2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
               SCOP domains d1aipd1 D:2-53                                      d1aipd2 D:54-196 Elongation factor Ts (EF-Ts), dimerisation domain                                                                              SCOP domains
               CATH domains 1aipD03 D:2-54                                       1aipD01 D:55-109,D:155-196                             1aipD02 D:110-154                            1aipD01 D:55-109,D:155-196                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh...hhhhhhhhhh.....hhhhhhhhhhhhhhhhhh......eeeeeeee.....eeeeeeeee..hhhh..hhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh.hhh..........hhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------EF_TS_1         -------------------------------------------------EF_TS_2    --------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip D   2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191     


Chain E from PDB  Type:PROTEIN  Length:372
 aligned with EFTU1_THETH | P60338 from UniProtKB/Swiss-Prot  Length:406

    Alignment length:397
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       
          EFTU1_THETH    10 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406
               SCOP domains d1aipe3 E:9-212 Elongation facto                         r Tu (EF-Tu), N-terminal (G) domain                                                                                                                d1aipe1 E:213-312 Elongation factor Tu (EF-Tu), domain 2                                            d1aipe2 E:313-405 Elongation factor Tu (EF-Tu)                                                SCOP domains
               CATH domains 1aipE01 E:9-213 P-loop containin                         g nucleotide triphosphate hydrolases                                                                                                                --1aipE02 E:216-345 Translation factors                                                                                             ---1aipE03 E:349-404 Translation factors                   - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee......hhhhhhhhhhhhh....-------------------------...eee....eeeeee...hhhhhhhhhh......eeeeeee......hhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh........eee..hhhhhhhhhh.........hhhhhhhhhhhhhhhh............eee...eeee...eeeeeee..........eeeee......eeeeeeeeee............eeeeee............eee.....eee.eeeeeeee................eeeee.....eeeeee............eeeeeeee...eee....eeeee....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------G_TR_1          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip E   9 KPHVNVGTIGHVDHGKTTLTAALTYVTAAENP-------------------------AHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 405
                                    18        28        38 |       -         -       |68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       
                                                          40                        66                                                                                                                                                                                                                                                                                                                                                   


Chain F from PDB  Type:PROTEIN  Length:372
 aligned with EFTU1_THETH | P60338 from UniProtKB/Swiss-Prot  Length:406

    Alignment length:397
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       
          EFTU1_THETH    10 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406
               SCOP domains d1aipf3 F:9-212 Elongation facto                         r Tu (EF-Tu), N-terminal (G) domain                                                                                                                d1aipf1 F:213-312 Elongation factor Tu (EF-Tu), domain 2                                            d1aipf2 F:313-405 Elongation factor Tu (EF-Tu)                                                SCOP domains
               CATH domains 1aipF01 F:9-213 P-loop containin                         g nucleotide triphosphate hydrolases                                                                                                                --1aipF02 F:216-346 Translation factors                                                                                              ---1aipF03 F:350-404 Translation factors                  - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee......hhhhhhhhhhhhh....-------------------------...eee....eeeeee...hhhhhhhhhh......eeeeeee......hhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhhhhhhh........eee..hhhhhhhhhh.........hhhhhhhhhhhhhhhh..................eee.....eeeeee..........eeeee......eeee..................eeeee.............eeee....eee.eeeeeeee................eeee......eeeeee............eeeeeeee...eee.......eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------G_TR_1          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip F   9 KPHVNVGTIGHVDHGKTTLTAALTYVTAAENP-------------------------AHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 405
                                    18        28        38 |       -         -       |68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       
                                                          40                        66                                                                                                                                                                                                                                                                                                                                                   


Chain G from PDB  Type:PROTEIN  Length:195
 aligned with EFTS_THET8 | P43895 from UniProtKB/Swiss-Prot  Length:196

    Alignment length:195
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191     
           EFTS_THET8     2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
               SCOP domains d1aipg1 G:2-53                                      d1aipg2 G:54-196 Elongation factor Ts (EF-Ts), dimerisation domain                                                                              SCOP domains
               CATH domains 1aipG03 G:2-54                                       1aipG01 G:55-109,G:155-196                             1aipG02 G:110-154                            1aipG01 G:55-109,G:155-196                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh...hhhhhhhhhh....hhhhhhhhhhhhhhhhhhh......eeeeeeee.....eeeeeeeee..hhhhh.hhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------EF_TS_1         -------------------------------------------------EF_TS_2    --------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip G   2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191     


Chain H from PDB  Type:PROTEIN  Length:194
 aligned with EFTS_THET8 | P43895 from UniProtKB/Swiss-Prot  Length:196

    Alignment length:194
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192    
           EFTS_THET8     3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
               SCOP domains d1aiph1 H:3-53                                     d1aiph2 H:54-196 Elongation factor Ts (EF-Ts), dimerisation domain                                                                              SCOP domains
               CATH domains 1aipH03 H:3-54                                      1aipH01 H:55-109,H:155-196                             1aipH02 H:110-154                            1aipH01 H:55-109,H:155-196                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhh...hhhhhhhhhh........hhhhhhhhhhhhhhh......eeeeeeee.....eeeeeeeee..hhhh..hhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh...........hhhh....hhhhhhhh..............hhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------EF_TS_1         -------------------------------------------------EF_TS_2    --------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aip H   3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 196
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (5, 20)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (5, 24)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1AIP)

(-) Gene Ontology  (8, 13)

Asymmetric Unit(hide GO term definitions)
Chain A,B,E,F   (EFTU1_THETH | P60338)
molecular function
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0003924    GTPase activity    Catalysis of the reaction: GTP + H2O = GDP + phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0003746    translation elongation factor activity    Functions in chain elongation during polypeptide synthesis at the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
    GO:0006414    translational elongation    The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Chain C,D,G,H   (EFTS_THET8 | P43895)
molecular function
    GO:0003746    translation elongation factor activity    Functions in chain elongation during polypeptide synthesis at the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
    GO:0006414    translational elongation    The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

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  1aip
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  EFTS_THET8 | P43895
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  EFTU1_THETH | P60338
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        EFTS_THET8 | P43895: 1tfe
        EFTU1_THETH | P60338: 1exm 1ha3 4h9g 4lbv 4lbw 4lby 4lbz 4lc0

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1AIP)