Image LibraryNucleic Acid Database Archives

Entries with manually generated images from the JenaLib are marked in bold .


NAMES FOR B-DNA'S WITH SPECIAL FEATURES

------------------------------------------------------------------------

 NDB     PDB   CSD   Descriptor                                    Coord 

------------------------------------------------------------------------

 BD0006   431D  n.a.  5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'        Y    
 BD0008   455D  n.a.  CROSSLINKED 5'-                               Y    
                     D(*CP*GP*CP*GP*AP*(SSP)AP*TP*TP*CP*GP*CP*G)-       
                     3'       
 BD0014   463D  n.a.  5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'  Y    
 BD0016   475D  n.a.  5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*G)-3'           Y    
 BD0017   1D3R  n.a.  5'-                                           Y    
                     D(*CP*(BRO)UP*CP*CP*(BRO)UP*CP*CP*GP*CP*GP*C       
                     P*G)-3', 5'-D(*CP*GP*CP*GP*CP*GP*GP*AP*G)-3'       
 BD0018   476D  n.a.  5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'     Y    
 BD0019   477D  n.a.  5'-D(*GP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'  Y    
 BD0020   478D  n.a.  5'-                                           Y    
                     D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-       
                     3'       
 BD0022   1QP5  n.a.  5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-    Y    
                     3', 5'-       
                     D(*TP*GP*TP*GP*GP*CP*GP*CP*CP*GP*GP*T)-3'       
 BD0027   1DCR  n.a.  5'-D(*CP*CP*GP*AP*AP*(BRO)UP*GP*AP*GP*G)-3'   Y    
 BD0032   1EHV  n.a.  5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'  Y    
 BD0037   1ENN  n.a.  5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*G)-3'           Y    
 BD0056   1K71  n.a.  5'-D(*TP*GP*GP*CP*CP*TP*TP*AP*AP*GP*G)-3'     Y    
 BD0061   1N5C  n.a.  5'-                                           Y    
                     D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDC)P*GP*CP*G)-       
                     3'       
 BD0069   1S9B  n.a.  5'-D(*GP*AP*AP*TP*TP*CP*G)-3'                 Y    
 BD0070   1SGS  n.a.  5'-                                           Y    
                     D(*CP*GP*CP*TP*GP*GP*AP*AP*AP*TP*TP*TP*CP*CP       
                     *AP*GP*C)-3'       
 BDF062   206D  n.a.  5'-D(*CP*GP*GP*TP*GP*G)-3', SPERMINE          Y    
 BDF068   251D  n.a.  5'-D(*CP*TP*CP*GP*AP*G)-3'                    Y    
 BDL021   n.a.  n.a.  5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*CP*GP*CP*G)-    Y    
                     3'/ 5'-D(*CP*GP*CP*GP*TP*T)-3'+ 5'-       
                     D(*TP*TP*CP*GP*CP*G)-3', MODEL A4       
 BDL032   1NDN  n.a.  5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*CP*GP*CP*G)-    Y    
                     3'/ 5'-D(*CP*GP*CP*GP*TP*T*)-3'+ 5'-       
                     D(*TP*TP*CP*GP*CP*G)-3', MODEL T4       
 BDL034   n.a.  n.a.  5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-    n.a. 
                     3',-15 C       
 DD0062   1RQY  n.a.  5'-D(*CP*GP*TP*AP*CP*G)-3', 9-amino-[N-(2-    Y    
                     dimethylamino)proply]-acridine-4-carboxamide       
 UD0012   1G6D  n.a.  PEPTIDYL-D(CGCAATTGCG)                        Y    
 UD0023   1NQS  n.a.  5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3'        Y    
 UD0024   1NT8  n.a.  CCGGTACCGG                                    Y    
------------------------------------------------------------------------

Page 1 created by the NDB Project on Wed May 26 14:30:07 2004



NAMES FOR B-DNA'S WITH SPECIAL FEATURES

------------------------------------------------------------------------

 NDB     PDB   CSD   Descriptor                                    Coord 

------------------------------------------------------------------------

 UD0025   1NVN  n.a.  5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3'        Y    
 UD0026   1NVY  n.a.  5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3'        Y    
 UD0028   1P4Y  n.a.  5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'        Y    
 UD0030   1P54  n.a.  5'-D(*CP*CP*AP*GP*TP*AP*CP*(BRU)P*GP*G)-3'    Y    
 UDH052   284D  n.a.  5'-CD(*P*AP*TP*TP*CP*AP*TP*TP*C)-3'           Y    
 UDI030   208D  n.a.  5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*G)-3'           Y    
 UDI047   253D  n.a.  5'-D(*GP*CP*GP*TP*AP*CP*GP*CP*G)-3'           Y    
 UDJ031   237D  n.a.  5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3'        Y    
 UDJ048   273D  n.a.  5'-D(*CP*GP*AP*CP*GP*AP*TP*CP*GP*T)-3'        Y    
 UDJ049   272D  n.a.  5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'        Y    
 UDJ060   309D  n.a.  5'-D(*CP*GP*AP*CP*GP*AP*TP*CP*GP*T)-3'        Y    
 UDM010   1D31  n.a.  5'-                                           Y    
                     D(*CP*GP*CP*AP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'       
 UDM017   n.a.  n.a.  5'-                                           n.a. 
                     D(*CP*GP*CP*AP*GP*AP*AP*TP*TP*CP*GP*CP*G)-       
                     3', SOAKED W/PROFLAVIN       
 UDO009   n.a.  n.a.  5'-                                           n.a. 
                     D(*CP*GP*CP*GP*AP*AP*AP*TP*TP*TP*AP*CP*GP*CP       
                     *G)-3'       
------------------------------------------------------------------------

Page 2 created by the NDB Project on Wed May 26 14:30:07 2004