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(-) Description

Title :  CRYSTAL STRUCTURE OF MOCVNH3 VARIANT (MO0V) IN COMPLEX WITH (N-GLCNAC)3
 
Authors :  L. M. I. Koharudin, A. M. Gronenborn
Date :  25 Jun 15  (Deposition) - 12 Aug 15  (Release) - 11 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Lectin, N-Acetylglucosamine, Cvnh, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. M. Koharudin, K. T. Debiec, A. M. Gronenborn
Structural Insight Into Fungal Cell Wall Recognition By A Cvnh Protein With A Single Lysm Domain.
Structure V. 23 2143 2015
PubMed-ID: 26455798  |  Reference-DOI: 10.1016/J.STR.2015.07.023

(-) Compounds

Molecule 1 - MOCVNH3 VARIANT
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: ROSETTA2 (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 175-341
    Organism Common: RICE BLAST FUNGUS
    Organism Scientific: MAGNAPORTHE ORYZAE
    Organism Taxid: 318829

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:61 , GLN A:62 , GLY A:63 , ASP A:64 , THR A:65 , LEU A:66 , ARG A:67 , PHE A:77 , GLU A:89 , ASP A:90 , LEU A:91 , ILE A:92 , TYR A:93 , PRO A:94 , HOH A:309 , HOH A:318 , HOH A:323binding site for Poly-Saccharide residues NAG A 201 through NAG A 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5C8P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5C8P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5C8P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5C8P)

(-) Exons   (0, 0)

(no "Exon" information available for 5C8P)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:151
                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhh.eeeeeee..eeeeeee.....eeeeeee....eee....eee...eeee.....hhhhhhhhh..hhhhhhhhh............eeee..hhhh.eeeeeeehhh.eeeeeeee..eeeeeeee....eeee..eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5c8p A   1 GNYAGNFSGSSRDICLDGARLRAECRRGDGGYSTSVIDLNRYLSNDNGHFRWVSTATVTVQQGDTLRDIGRRFDCDFHEIARRNNIQNEDLIYPGQVLQVGGNFWDSARDVRLVDGGKVLEAELRYSGGWNRSRIYLDEHIGNRNGELIHC 151
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5C8P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5C8P)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5C8P)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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  L7JBY8_MAGOP | L7JBY8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        L7JBY8_MAGOP | L7JBY8: 5c8o 5c8q
UniProtKB/TrEMBL
        G4N991_MAGO7 | G4N991: 2l9y 5c8o 5c8q

(-) Related Entries Specified in the PDB File

5c8o 5c8q