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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CURACIN BIOSYNTHETIC PATHWAY HMG SYNTHASE
 
Authors :  F. P. Maloney, J. L. Smith
Date :  02 Jul 16  (Deposition) - 31 Aug 16  (Release) - 21 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Hmg Synthase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. P. Maloney, L. Gerwick, W. H. Gerwick, D. H. Sherman, J. L. Smith
Anatomy Of The Beta-Branching Enzyme Of Polyketide Biosynthesis And Its Interaction With An Acyl-Acp Substrate
Proc. Natl. Acad. Sci. Usa V. 113 10316 2016
PubMed-ID: 27573844  |  Reference-DOI: 10.1073/PNAS.1607210113

(-) Compounds

Molecule 1 - CURD
    Chains: A
    EC Number: 2.3.3.10
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: LYNGBM3L_74540
    Mutation: YES
    Organism Scientific: MOOREA PRODUCENS 3L
    Organism Taxid: 489825
    Synonym: HYDROXYMETHYLGLUTARYL-COA SYNTHASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:231 , VAL A:235 , ARG A:320binding site for residue SO4 A 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5KP5)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gly A:329 -Cys A:330

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KP5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KP5)

(-) Exons   (0, 0)

(no "Exon" information available for 5KP5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:403
                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee...eeeehhhhhhhh...hhhhhhhh..eeee.....hhhhhhhhhhhhhhhhhhhhhhhheeeeeee..........hhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhhhh......eeeeeeeee.........eeeeeeeee.....eeeeeeeeeeee.....ee.......eehhhhhhhhhhhhhhhhhhhhhhhh..........eeee...hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.....eeeeeeeee...eeeeeeeeehhhhhhhhhh.hhhhhhhh.ee.hhhhhhhhhhhhhhhh.....ee.....hhhhhhh......eeeeeee..eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kp5 A   2 QQVGIEALSVYGGAAQLELRKLAQARQLDISRFDNLMMKEKAVSLPYEDPVSYAVNAAKPIIDRLSDADKQRIEMVITCSESGIDFGKSMSTYIQEYLGLSRNCRMFELKQACYSGTAGLQMAINLILSQTFPGAKALVIATDISRFAEPSSGAGAVALLVSDTPHIFQIDVGCNGYYGYEVMDTCRPNPDSEAGDADLSLLSYLDCCENAYRHYQNRVEGVDYRESFDYLSFHTPFGGMVKGAHRNMMRRLKRAKPAEIEADFQRRVMPGLVYCQQVGNIMGATLFLSLASTIDNGDFSTPRRIGMFSYGSGCCSEFYSGVVTPEGAAIAAQQGISAQLADRYSLSMEEYEQLLYHSSAVAFGTRNVTLDYQLFPGVWKKIAGKGRLVLKAIKEFHRKYEWV 419
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      |166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416   
                                                                                                                                                                            148|                                                                                                                                                                                                                                                               
                                                                                                                                                                             164
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KP5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5KP5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5KP5)

(-) Gene Ontology  (6, 6)

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    Gly A:329 - Cys A:330   [ RasMol ]  
 
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  5kp5
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  F4Y432_9CYAN | F4Y432
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        F4Y432_9CYAN | F4Y432: 5kp6 5kp7 5kp8

(-) Related Entries Specified in the PDB File

5kp6 5kp7