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(-) Description

Title :  CRYSTAL STRUCTURE OF THE FLAGELLAR CAP PROTEIN FLID D2-D3 DOMAINS FROM ESCHERICHIA COLI
 
Authors :  W. S. Song, S. Y. Cho, H. J. Hong, S. I. Yoon
Date :  09 Nov 16  (Deposition) - 22 Feb 17  (Release) - 05 Apr 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (6x)
Biol. Unit 2:  B  (6x)
Keywords :  Bacterial Flagellar Cap Protein, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. S. Song, S. Y. Cho, H. J. Hong, S. C. Park, S. I. Yoon
Self-Oligomerizing Structure Of The Flagellar Cap Protein Flid And Its Implication In Filament Assembly.
J. Mol. Biol. V. 429 847 2017
PubMed-ID: 28179186  |  Reference-DOI: 10.1016/J.JMB.2017.02.001

(-) Compounds

Molecule 1 - FLAGELLAR HOOK-ASSOCIATED PROTEIN 2
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: UNP RESIDUES 71-267
    Gene: FLID, OO96_01215
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: HAP2,FLAGELLAR CAP PROTEIN

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (6x): A 
Biological Unit 2 (6x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5H5W)

(-) Sites  (0, 0)

(no "Site" information available for 5H5W)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5H5W)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5H5W)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5H5W)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5H5W)

(-) Exons   (0, 0)

(no "Exon" information available for 5H5W)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:198
                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeee....eeeee......eeeeeeeee.....eeee...............eeeeeee......eeeee.....hhhhhhhhhhhhh..eeeeeeeee..eeeeeeee...hhhh.eeeeee.hhhhhhhhh.........eeeee....eeeee..eeeee...ee......eeeee........eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5h5w A  70 LSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQD 267
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259        


Chain B from PDB  Type:PROTEIN  Length:195
                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....eeeee......eeeeeeeee.....eeee...............eeeeeee......eeeee.....hhhhhhhhhhhh...eeeeeeeee..eeeeeeee...hhhh.eeeeee.hhhhhhhhh.........eeeee....eeeee..eeeee...ee.....eeeee........eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5h5w B  72 ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISALENITLNLNDVTTGNQTLTITQD 267
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241||     252       262     
                                                                                                                                                                                                    242|                       
                                                                                                                                                                                                     244
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5H5W)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5H5W)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5H5W)

(-) Gene Ontology  (7, 7)

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 Related Entries

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        FLID_ECOLI | P24216: 5h5v

(-) Related Entries Specified in the PDB File

5h5s 5h5v