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(-) Description

Title :  THE CRYSTAL STRUCTURE OF HEMAGGLUTININ FORM A/CHICKEN/NEW YORK/14677-13/1998 IN COMPLEX WITH LSTA
 
Authors :  H. Yang, P. J. Carney, J. C. Chang, J. M. Villanueva, J. Stevens
Date :  28 Oct 14  (Deposition) - 25 Feb 15  (Release) - 01 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Keywords :  Influenza Virus, Hemagglutinin, H6, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Yang, P. J. Carney, J. C. Chang, J. M. Villanueva, J. Stevens
Structure And Receptor Binding Preferences Of Recombinant Hemagglutinins From Avian And Human H6 And H10 Influenza A Virus Subtypes.
J. Virol. V. 89 4612 2015
PubMed-ID: 25673707  |  Reference-DOI: 10.1128/JVI.03456-14

(-) Compounds

Molecule 1 - HEMAGGLUTININ
    Chains: A, B, C, E, D, F
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Taxid: 7111
    Gene: HA
    Organism Scientific: INFLUENZA A VIRUS (A/CHICKEN/NEW YORK/14677- 13/1998(H6N2))
    Organism Taxid: 402503
    Strain: A/CHICKEN/NEW YORK/14677-13/1998(H6N2)

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABC   
Biological Unit 2 (1x):    DEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 20)

Asymmetric Unit (3, 20)
No.NameCountTypeFull Name
1GAL3Ligand/IonBETA-D-GALACTOSE
2NAG14Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SIA3Ligand/IonO-SIALIC ACID
Biological Unit 1 (3, 9)
No.NameCountTypeFull Name
1GAL1Ligand/IonBETA-D-GALACTOSE
2NAG7Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SIA1Ligand/IonO-SIALIC ACID
Biological Unit 2 (3, 11)
No.NameCountTypeFull Name
1GAL2Ligand/IonBETA-D-GALACTOSE
2NAG7Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SIA2Ligand/IonO-SIALIC ACID

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:35 , GLN A:36 , ASN A:295 , VAL A:296 , LYS A:311binding site for Poly-Saccharide residues NAG A 2000 through NAG A 2001 bound to ASN A 295
02AC2SOFTWAREGLN B:15 , ASN B:23binding site for Mono-Saccharide NAG B 601 bound to ASN B 23
03AC3SOFTWARETHR B:35 , ASN B:295 , LYS B:311binding site for Mono-Saccharide NAG B 602 bound to ASN B 295
04AC4SOFTWAREASN C:23binding site for Mono-Saccharide NAG C 601 bound to ASN C 23
05AC5SOFTWARETHR C:35 , ASN C:295 , LYS C:311binding site for Mono-Saccharide NAG C 602 bound to ASN C 295
06AC6SOFTWAREASN D:23binding site for Mono-Saccharide NAG D 900 bound to ASN D 23
07AC7SOFTWAREASN E:23binding site for Mono-Saccharide NAG E 602 bound to ASN E 23
08AC8SOFTWARETHR E:35 , ASN E:295 , LYS E:311binding site for Mono-Saccharide NAG E 601 bound to ASN E 295
09AC9SOFTWARETHR F:35 , GLN F:36 , ASN F:295 , LYS F:311binding site for Poly-Saccharide residues NAG F 601 through NAG F 602 bound to ASN F 295
10AD1SOFTWARETYR C:91 , SER C:129 , VAL C:131 , THR C:132 , SER C:133 , TRP C:149 , HIS C:180 , GLU C:187 , LEU C:191 , GLN C:223 , GLY C:225binding site for Poly-Saccharide residues SIA C 603 through NAG C 605
11AD2SOFTWARETYR C:91 , SER C:129 , VAL C:131 , THR C:132 , SER C:133 , TRP C:149 , HIS C:180 , GLU C:187 , LEU C:191 , GLN C:223 , GLY C:225 , TYR E:91 , SER E:129 , VAL E:131 , THR E:132 , SER E:133 , HIS E:180 , GLU E:187 , LEU E:191 , GLN E:223 , GLY E:225binding site for Poly-Saccharide residues SIA E 603 through NAG E 605
12AD3SOFTWARETYR E:91 , SER E:129 , VAL E:131 , THR E:132 , SER E:133 , HIS E:180 , GLU E:187 , LEU E:191 , GLN E:223 , GLY E:225 , TYR F:91 , SER F:129 , VAL F:131 , THR F:132 , SER F:133 , TRP F:149 , HIS F:180 , GLU F:187 , LEU F:191 , GLN F:223binding site for Poly-Saccharide residues SIA F 603 through NAG F 605

(-) SS Bonds  (36, 36)

Asymmetric Unit
No.Residues
1A:4 -A:465
2A:42 -A:276
3A:55 -A:67
4A:90 -A:135
5A:280 -A:304
6A:472 -A:476
7B:4 -B:465
8B:42 -B:276
9B:55 -B:67
10B:90 -B:135
11B:280 -B:304
12B:472 -B:476
13C:4 -C:465
14C:42 -C:276
15C:55 -C:67
16C:90 -C:135
17C:280 -C:304
18C:472 -C:476
19D:4 -D:465
20D:42 -D:276
21D:55 -D:67
22D:90 -D:135
23D:280 -D:304
24D:472 -D:476
25E:4 -E:465
26E:42 -E:276
27E:55 -E:67
28E:90 -E:135
29E:280 -E:304
30E:472 -E:476
31F:4 -F:465
32F:42 -F:276
33F:55 -F:67
34F:90 -F:135
35F:280 -F:304
36F:472 -F:476

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4WSS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WSS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WSS)

(-) Exons   (0, 0)

(no "Exon" information available for 4WSS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:490
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eee......ee....hhhhhhhhhhhhhhhh..ee...eee...........eee.hhhhhhhhhhheeeeeeee..hhhhh.........eeeeee..eee....eee...........eeeeee.....eeeeeeeeee..hhhhhhhhh......eeee....eeee...............eeeeeeeee....eeeeee...eeee.eeeeeee......eee....eeeee..eee..eee.....ee.....eee...ee......eee..........hhhhh.........eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....eeee....hhhhhhhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wss A   1 DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKLLGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGGSSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAKGPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVCQTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRNVPQIAGFIEGGWTGMVDGWYGYHHENSQGSGYAADKESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERTLDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLNRE 499
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   ||  339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499
                                                                                                                                                                                                                                                                                                                                                             324|                                                                                                                                                                     
                                                                                                                                                                                                                                                                                                                                                              334                                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:481
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eee......ee....hhhhhhhhhhhhhhhh..ee...eee...........eee.hhhhhhhhhhheeeeeeee..hhhhh.........eeeeee..eee....eee...........eeeeee.....eeeeeeeeee..hhhhhhhhh......eeee....eeee...............eeeeeeeee....eeeeee...eeee.eeeeeee......eee....eeeee..eee..eee.....ee.....eee...ee......eee.................eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....eeee....hhhhhhhhhh...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wss B   1 DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKLLGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGGSSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAKGPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVCQTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRNVPGGWTGMVDGWYGYHHENSQGSGYAADKESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERTLDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLN 497
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  ||   346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496 
                                                                                                                                                                                                                                                                                                                                                            323|                                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                             340                                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:482
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eee......ee....hhhhhhhhhhhhhhhh..ee...eee...........eee.hhhhhhhhhhheeeeeeee..hhhhh.........eeeeee..eee....eee...........eeeeee.....eeeeeeeeee..hhhhhhhhh......eeee....eeee...............eeeeeeeee....eeeeee...eeee.eeeeeee......eee....eeeee..eee..eee.....ee.....eee...ee......eee.................eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....eeee....hhhhhhhhhh...hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wss C   1 DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKLLGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGGSSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAKGPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVCQTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRNVPGGWTGMVDGWYGYHHENSQGSGYAADKESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERTLDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLNR 498
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  ||   346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496  
                                                                                                                                                                                                                                                                                                                                                            323|                                                                                                                                                              
                                                                                                                                                                                                                                                                                                                                                             340                                                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:493
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eee......ee....hhhhhhhhhhhhhhhh..ee...eee...........eee.hhhhhhhhhhheeeeeeee..hhhhh.........eeeeee..eee....eee...........eeeeee.....eeeeeeeeee..hhhhhhhhh......eeee....eeee...............eeeeeeeee....eeeeee...eeee.eeeeeee......eee....eeeee..eee..eee.....ee.....eee...ee......eee..............hhhhh.........eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....eeee....hhhhhhhhhh...hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wss D   1 DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKLLGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGGSSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAKGPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVCQTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRNVPGLFGAIAGFIEGGWTGMVDGWYGYHHENSQGSGYAADKESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERTLDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLNR 498
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  ||   335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495   
                                                                                                                                                                                                                                                                                                                                                            323|                                                                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                             329                                                                                                                                                                         


Chain E from PDB  Type:PROTEIN  Length:489
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eee......ee....hhhhhhhhhhhhhhhh..ee...eee...........eee.hhhhhhhhhhheeeeeeee..hhhhh.........eeeeee..eee....eee...........eeeeee.....eeeeeeeeee..hhhhhhhhh......eeee....eeee...............eeeeeeeee....eeeeee...eeee.eeeeeee......eee....eeeee..eee..eee.....ee.....eee...ee......eee..........hhhhh.........eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....eeee....hhhhhhhhhh...hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wss E   1 DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKLLGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGGSSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAKGPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVCQTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRNVPQIAGFIEGGWTGMVDGWYGYHHENSQGSGYAADKESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERTLDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLNR 498
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   ||  339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489         
                                                                                                                                                                                                                                                                                                                                                             324|                                                                                                                                                                    
                                                                                                                                                                                                                                                                                                                                                              334                                                                                                                                                                    


Chain F from PDB  Type:PROTEIN  Length:479
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eee......ee....hhhhhhhhhhhhhhhh..ee...eee...........eee.hhhhhhhhhhheeeeeeee..hhhhh.........eeeeee..eee....eee...........eeeeee.....eeeeeeeeee..hhhhhhhhh......eeee....eeee...............eeeeeeeee....eeeeee...eeee.eeeeeee......eee....eeeee..eee..eee.....ee.....eee...ee......eee..............eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....eeee....hhhhhhhhhh....hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wss F   1 DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKLLGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGGSSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAKGPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVCQTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRGGWTGMVDGWYGYHHENSQGSGYAADKESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERTLDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLNR 498
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320|      349       359       369       379       389       399       409       419       429       439       449       459       469       479       489         
                                                                                                                                                                                                                                                                                                                                                         320|                                                                                                                                                              
                                                                                                                                                                                                                                                                                                                                                          340
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WSS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WSS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WSS)

(-) Gene Ontology  (17, 17)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        Q0A3A5_9INFA | Q0A3A5: 4wsr

(-) Related Entries Specified in the PDB File

4wsr 4wst 4wsu 4wsv 4wsw 4wsx