4OJI - JenaLib

Title :   CRYSTAL STRUCTURE OF TWISTER RIBOZYME

Authors :   Y. Liu, T. J. Wilson, S. A. Mcphee, D. M. J. Lilley

Date :   21 Jan 14 (Deposition) - 23 Jul 14 (Release) - 03 Sep 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A

Keywords :   Pseudoknot, Self-Cleavage, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Liu, T. J. Wilson, S. A. Mcphee, D. M. Lilley
Crystal Structure And Mechanistic Investigation Of The Twister Ribozyme.
Nat. Chem. Biol. V. 10 739 2014
PubMed-ID: 25038788 | Reference-DOI: 10.1038/NCHEMBIO.1587

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 6)

Sites (5, 5)

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HOH A:245 , HOH A:246 , HOH A:247 , HOH A:248 , HOH A:249 , HOH A:250	BINDING SITE FOR RESIDUE MG A 101
2	AC2	SOFTWARE	HOH A:223 , HOH A:224 , HOH A:225 , HOH A:226 , HOH A:227 , HOH A:228	BINDING SITE FOR RESIDUE MG A 102
3	AC3	SOFTWARE	HOH A:222 , HOH A:229 , HOH A:230 , HOH A:244	BINDING SITE FOR RESIDUE MG A 103
4	AC4	SOFTWARE	U A:24 , C A:25 , C A:26 , HOH A:205 , HOH A:206 , HOH A:207 , HOH A:208	BINDING SITE FOR RESIDUE MG A 104
5	AC5	SOFTWARE	DU A:6 , HOH A:209 , HOH A:210 , HOH A:211 , HOH A:212 , HOH A:213	BINDING SITE FOR RESIDUE MG A 105

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:DNA/RNA  Length:52
                                                                                   
                  4oji A  1 CCGCCxAACACUGCCAGCCGGUCCCAAGCCCGGAUAAAAGUGGAGGGGGCGG 54
                                 |  10     || 22        32        42        52  
                                 6-DU     16|                                   
                                           19

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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Description