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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TWISTER RIBOZYME
Keywords PSEUDOKNOT, SELF-CLEAVAGE, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4OJI     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 52 1114 0
2  Ligand   RNA (52-MER)  A 5 0 5
3 Water     50 0 50
total       107 1114 55

Nucleic acids
Unit 1 C1 C2 G3 C4 C5 DU6 A7 A8 C9 A10 C11 U12 G13 C14 C15 A16 G19 C20 C21 G22 G23 U24 C25 C26 C27 A28 A29 G30 C31 C32 C33 G34 G35 A36 U37 A38 A39 A40 A41 G42 U43 G44 G45 A46 G47 G48 G49 G50 G51 C52 G53 G54

Ligands
Unit 2 MG101 MG102 MG103 MG104 MG105

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany