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(-) Description

Title :  U/G WOBBLE BASE PAIR IN A RNA DUPLEX
 
Authors :  S. Jiang, H. Sun, J. Gan, Z. Huang
Date :  18 Feb 13  (Deposition) - 29 Jan 14  (Release) - 29 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.23
Chains :  Asym./Biol. Unit :  A,B
Keywords :  U/G Wobble Pair, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Jiang, H. Sun, J. Gan, Z. Huang
2-Se Uridine Enhanced U/G Wobble Base Pair Discrimination
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - RNA (5'-R(*GP*UP*GP*UP*AP*UP*AP*C)-3')
    ChainsA, B
    EngineeredYES
    Organism CommonSYNTHETIC CONSTRUCT
    Organism Taxid32630
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric/Biological Unit (1, 5)
No.NameCountTypeFull Name
1SR5Ligand/IonSTRONTIUM ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREU A:4BINDING SITE FOR RESIDUE SR A 101
2AC2SOFTWAREU A:6BINDING SITE FOR RESIDUE SR A 102
3AC3SOFTWAREC A:8BINDING SITE FOR RESIDUE SR A 103
4AC4SOFTWAREU B:14BINDING SITE FOR RESIDUE SR B 101

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:RNA  Length:8
                                       
                  4jab A  1 GUGUAUAC  8

Chain B from PDB  Type:RNA  Length:8
                                       
                  4jab B  9 GUGUAUAC 16

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

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4jah