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Sequence, Chains, Asymmetric and Biological Units

Title U/G WOBBLE BASE PAIR IN A RNA DUPLEX
Keywords U/G WOBBLE PAIR, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4JAB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 8 167 0
2  RNA    B 8 167 0
3  Ligand   RNA (5'-R(*GP*UP*GP*UP*AP*UP*AP*C)-3')  A 4 0 4
4  Ligand   RNA (5'-R(*GP*UP*GP*UP*AP*UP*AP*C)-3')  B 1 0 1
total       21 334 5

Nucleic acids
Unit 1 G1 U2 G3 U4 A5 U6 A7 C8
Unit 2 G9 U10 G11 U12 A13 U14 A15 C16

Ligands
Unit 3 SR101 SR102 SR103 SR104
Unit 4 SR101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany