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(-) Description

Title :  MODULATION OF S.AUREUS PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C MEMBRANE BINDING.
 
Authors :  J. Cheng, R. Goldstein, B. Stec, A. Gershenson, M. F. Roberts
Date :  08 May 12  (Deposition) - 12 Dec 12  (Release) - 12 Dec 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha Beta Barrel, Phosphatidylinostol-Specific Phospholipase C, Membrane Interface, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Cheng, R. Goldstein, B. Stec, A. Gershenson, M. F. Roberts
Competition Between Anion Binding And Dimerization Modulate Staphylococcus Aureus Phosphatidylinositol-Specific Phospholipase C Enzymatic Activity.
J. Biol. Chem. V. 287 40317 2012
PubMed-ID: 23038258  |  Reference-DOI: 10.1074/JBC.M112.395277

(-) Compounds

Molecule 1 - 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE
    Chains: A
    EC Number: 4.6.1.13
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 11-312
    Gene: PLC, NWMN_0041
    Mutation: YES
    Organism Scientific: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS
    Organism Taxid: 426430
    Strain: NEWMAN
    Synonym: PHOSPHATIDYLINOSITOL DIACYLGLYCEROL-LYASE, PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C, PI-PLC

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1ACT3Ligand/IonACETATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:113 , ARG A:166 , TRP A:185 , HOH A:518 , HOH A:599BINDING SITE FOR RESIDUE ACT A 401
2AC2SOFTWARELEU A:37 , LYS A:38 , ASP A:39 , LYS A:42 , HIS A:86BINDING SITE FOR RESIDUE ACT A 402
3AC3SOFTWAREHIS A:30 , HIS A:80 , TYR A:208 , VAL A:242 , ALA A:243 , HOH A:511 , HOH A:572BINDING SITE FOR RESIDUE ACT A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4F2T)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4F2T)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F2T)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F2T)

(-) Exons   (0, 0)

(no "Exon" information available for 4F2T)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:302
                                                                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh....hhhhh.eeee.hhhhhhh.hhhhhhhhh....hhhhhhhh...eeeeeeeeee..eeeeee..eeeeeehhhhhhhhhhhhhhh....eeeeeee..........hhhhhhhhhh..hhhhh...........hhhhhh..eeeeee.......................eeeeee....eeeeee.....hhhhhhhhhhhhhhhhhh.....eeeeee...........hhhhhhhhhhhhhhhhhhhh......eeee...........hhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4f2t A   2 DSLSKSPENWMSKLDDGKHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTSNYASHINPEIAKTIKANGKARTGWLIVDYAGYTWPGYDDIVSEIIDSNKL 303
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4F2T)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F2T)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F2T)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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  4f2t
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  4.6.1.13
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PLC_STAAE | P45723: 3v16 3v18 3v1h 4f2b 4f2u 4i8y 4i90 4i9j 4i9m 4i9t 4rv3 4s3g

(-) Related Entries Specified in the PDB File

3v16 ACIDIC FORM
3v18 BASIC FORM
3v1h H258Y MUTANT
4f2b DIMER
4f2u