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(-) Description

Title :  A DE NOVO DESIGNED COILED COIL CC-PIL
 
Authors :  M. Bruning, A. R. Thomson, N. R. Zaccai, R. L. Brady, D. N. Woolfson
Date :  01 Mar 12  (Deposition) - 29 Aug 12  (Release) - 19 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.59
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. M. Fletcher, A. L. Boyle, M. Bruning, G. J. Bartlett, T. L. Vincent, N. R. Zaccai, C. T. Armstrong, E. H. Bromley, P. J. Booth, R. L. Brady, A. R. Thomson, D. N. Woolfson
A Basis Set Of De Novo Coiled-Coil Peptide Oligomers For Rational Protein Design And Synthetic Biology.
Acs Synth Biol V. 1 240 2012
PubMed-ID: 23651206  |  Reference-DOI: 10.1021/SB300028Q

(-) Compounds

Molecule 1 - COILED-COIL PEPTIDE CC-PIL
    Chains: A, B, C
    Engineered: YES
    Other Details: SOLID STATE PEPTIDE SYNTHESIS
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1ACE3Mod. Amino AcidACETYL GROUP
2PHI3Mod. Amino AcidIODO-PHENYLALANINE

(-) Sites  (0, 0)

(no "Site" information available for 4DZN)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4DZN)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4dzn A  0 xGEIAALKQEIAALKKEIAALKfEIAALKQGYY 32
                            |        9        19  |     29   
                            |                    22-PHI      
                            0-ACE                            


Chain B from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4dzn B  0 xGEIAALKQEIAALKKEIAALKfEIAALKQGYY 32
                            |        9        19  |     29   
                            0-ACE                22-PHI      


Chain C from PDB  Type:PROTEIN  Length:33
                                                                
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                  4dzn C  0 xGEIAALKQEIAALKKEIAALKfEIAALKQGYY 32
                            |        9        19  |     29   
                            0-ACE                22-PHI
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4DZN)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

4dzk 4dzl 4dzm