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(-) Description

Title :  CIRCULAR PERMUTATION OF THE TRP-CAGE: FOLD RESCUE UPON ADDITION OF A HYDROPHOBIC STAPLE
 
Authors :  A. Byrne, N. H. Andersen, B. L. Kier
Date :  18 Apr 13  (Deposition) - 25 Dec 13  (Release) - 15 Jan 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (32x)
NMR Structure *:  A  (1x)
Keywords :  Miniprotein, De Novo Protein, Trp-Cage, Circular Permutant, Microprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Byrne, B. L. Kier, D. V. Williams, M. Scian, N. H. Andersen
Circular Permutation Of The Trp-Cage: Fold Rescue Upon Addition Of A Hydrophobic Staple.
Rsc Adv V. 2013 19824 2013
PubMed-ID: 24376912  |  Reference-DOI: 10.1039/C3RA43674H

(-) Compounds

Molecule 1 - TRP-CAGE MINI-PROTEIN
    Chains: A
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
NMR Structure (32x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

NMR Structure (2, 2)
No.NameCountTypeFull Name
1AIB1Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
2DAL1Mod. Amino AcidD-ALANINE
NMR Structure * (2, 2)
No.NameCountTypeFull Name
1AIB1Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
2DAL1Mod. Amino AcidD-ALANINE

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:13 , LEU A:14 , ALA A:15 , ASP A:16 , GLY A:18 , TRP A:19 , ALA A:20BINDING SITE FOR RESIDUE DAL A 17

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2M7C)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2M7C)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2M7C)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2M7C)

(-) Exons   (0, 0)

(no "Exon" information available for 2M7C)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2m7c A  1 RPPPSDaAAYAQWLADxGWAS 21
                                  | 10      | 20 
                                  7-AIB    17-DAL
   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2M7C)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2M7C)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2M7C)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2M7C)

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  2m7c
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2M7C)

(-) Related Entries Specified in the PDB File

1l2y
2jof
2ldj RELATED ID: 19180 RELATED DB: BMRB
2ll5 CYCLO-TC1 TRP-CAGE
2m7d
3uc7
3uc8