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(-) Description

Title :  1H CHEMICAL SHIFT ASSIGNMENTS AND STRUCTURE OF TRP-CAGE MINI-PROTEIN WITH D-AMINO ACID
 
Authors :  A. R. Granillo, S. Annavarapu, L. Zhang, R. Koder, V. Nanda
Date :  27 May 11  (Deposition) - 23 Nov 11  (Release) - 30 Nov 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A
NMR Structure *:  A  (1x)
Keywords :  Computational Protein Design, D-Amino Acid, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Rodriguez-Granillo, S. Annavarapu, L. Zhang, R. L. Koder, V. Nanda
Computational Design Of Thermostabilizing D-Amino Acid Substitutions.
J. Am. Chem. Soc. V. 133 18750 2011
PubMed-ID: 21978298  |  Reference-DOI: 10.1021/JA205609C

(-) Compounds

Molecule 1 - TRP-CAGE MINI-PROTEIN
    Chains: A
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
NMR Structure : A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1DGN1Mod. Amino AcidD-GLUTAMINE
NMR Structure * (1, 1)
No.NameCountTypeFull Name
1DGN1Mod. Amino AcidD-GLUTAMINE

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:7 , LYS A:8 , ASP A:9 , GLY A:11 , PRO A:12 , SER A:13 , SER A:14BINDING SITE FOR RESIDUE DGN A 10

(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:20
                                                   
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author ..hhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                  2ldj A  1 NLYIQWLKDxGPSSGRPPPS 20
                                    10        20
                                    10-DGN
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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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