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Class: Multi-domain proteins (alpha and beta) (2421)
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Fold: DNA/RNA polymerases (850)
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Superfamily: DNA/RNA polymerases (850)
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Family: DNA polymerase I (233)
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Protein domain: DNA polymerase I (Klenow fragment) (82)
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Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422] (44)
1L3SA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA.
1L3TA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 10 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A SINGLE DTTP RESIDUE
1L3UA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 11 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP AND A DATP RESIDUE.
1L3VA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 15 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF DTTP, DATP, DCTP, AND DGTP RESIDUES.
1L5UA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 12 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP, A DATP, AND A DCTP RESIDUE.
1LV5A:469-876; B:469-876CRYSTAL STRUCTURE OF THE CLOSED CONFORMATION OF BACILLUS DNA POLYMERASE I FRAGMENT BOUND TO DNA AND DCTP
1NJWA:469-876GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NJXA:469-876THYMINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NJYA:469-876THYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NJZA:469-876CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK0A:469-876ADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK4A:469-876GUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK5A:469-876ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK6A:469-876CYTOSINE-CYTOSINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK7A:469-876GUANINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK8A:469-876A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.
1NK9A:469-876A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER TWO ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP AND DGTP.
1NKBA:469-876A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER THREE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, AND DTTP.
1NKCA:469-876A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER FIVE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, DTTP, AND DATP.
1NKEA:469-876A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.
1U45A:469-8768OXOGUANINE AT THE PRE-INSERTION SITE OF THE POLYMERASE ACTIVE SITE
1U47A:469-876CYTOSINE-8-OXOGUANINE BASE PAIR AT THE POLYMERASE ACTIVE SITE
1U48A:469-876EXTENSION OF A CYTOSINE-8-OXOGUANINE BASE PAIR
1U49A:469-876ADENINE-8OXOGUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1U4BA:469-876EXTENSION OF AN ADENINE-8OXOGUANINE MISMATCH
1UA0A:469-876AMINOFLUORENE DNA ADDUCT AT THE PRE-INSERTION SITE OF A DNA POLYMERASE
1UA1A:469-876STRUCTURE OF AMINOFLUORENE ADDUCT PAIRED OPPOSITE CYTOSINE AT THE POLYMERASE ACTIVE SITE.
1XC9A:469-876STRUCTURE OF A HIGH-FIDELITY POLYMERASE BOUND TO A BENZO[A]PYRENE ADDUCT THAT BLOCKS REPLICATION
1XWLA:469-876BACILLUS STEAROTHERMOPHILUS (NEWLY IDENTIFIED STRAIN AS YET UNNAMED) DNA POLYMERASE FRAGMENT
2BDPA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA
2HHQA:469-876O6-METHYL-GUANINE:T PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
2HHSA:469-876O6-METHYL:C PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
2HHTA:469-876C:O6-METHYL-GUANINE PAIR IN THE POLYMERASE-2 BASEPAIR POSITION
2HHUA:469-876C:O6-METHYL-GUANINE IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION)
2HHVA:469-876T:O6-METHYL-GUANINE IN THE POLYMERASE-2 BASEPAIR POSITION
2HHWA:469-876; D:469-876DDTTP:O6-METHYL-GUANINE PAIR IN THE POLYMERASE ACTIVE SITE, IN THE CLOSED CONFORMATION
2HHXA:469-876O6-METHYL-GUANINE IN THE POLYMERASE TEMPLATE PREINSERTION SITE
2HVHA:469-876; D:469-876DDCTP:O6MEG PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION)
2HVIA:469-876; D:469-876DDCTP:G PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION)
2HW3A:469-876T:O6-METHYL-GUANINE PAIR IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION)
3BDPA:469-876DNA POLYMERASE I/DNA COMPLEX
3EYZA:469-876COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA (OPEN FORM)
3EZ5A:469-876; D:469-876COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA , DCTP, AND ZINC (CLOSED FORM).
4BDPA:469-876CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 11 BASE PAIRS OF DUPLEX DNA AFTER ADDITION OF TWO DATP RESIDUES