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(-) Description

Title :  CRYSTAL STRUCTURE OF CARBON MONOXIDE DEHYDROGENASE FROM RHODOSPIRILLUM RUBRUM
 
Authors :  C. L. Drennan, J. Heo, M. D. Sintchak, E. Schreiter, P. W. Ludden
Date :  07 Aug 01  (Deposition) - 17 Oct 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Rossmann Fold, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. L. Drennan, J. Heo, M. D. Sintchak, E. Schreiter, P. W. Ludden
Life On Carbon Monoxide: X-Ray Structure Of Rhodospirillum Rubrum Ni-Fe-S Carbon Monoxide Dehydrogenase.
Proc. Natl. Acad. Sci. Usa V. 98 11973 2001
PubMed-ID: 11593006  |  Reference-DOI: 10.1073/PNAS.211429998
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CARBON MONOXIDE DEHYDROGENASE
    Chains: A, B, C, D, E, F
    EC Number: 1.2.99.2
    Organism Scientific: RHODOSPIRILLUM RUBRUM
    Organism Taxid: 1085
    Other Details: COOS GENE
    Synonym: CODH

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 27)

Asymmetric Unit (4, 27)
No.NameCountTypeFull Name
1FE26Ligand/IonFE (II) ION
2SF49Ligand/IonIRON/SULFUR CLUSTER
3UNX6Ligand/IonUNKNOWN ATOM OR ION
4WCC6Ligand/IonFE(3)-NI(1)-S(4) CLUSTER
Biological Unit 1 (4, 9)
No.NameCountTypeFull Name
1FE22Ligand/IonFE (II) ION
2SF43Ligand/IonIRON/SULFUR CLUSTER
3UNX2Ligand/IonUNKNOWN ATOM OR ION
4WCC2Ligand/IonFE(3)-NI(1)-S(4) CLUSTER
Biological Unit 2 (4, 9)
No.NameCountTypeFull Name
1FE22Ligand/IonFE (II) ION
2SF43Ligand/IonIRON/SULFUR CLUSTER
3UNX2Ligand/IonUNKNOWN ATOM OR ION
4WCC2Ligand/IonFE(3)-NI(1)-S(4) CLUSTER
Biological Unit 3 (4, 9)
No.NameCountTypeFull Name
1FE22Ligand/IonFE (II) ION
2SF43Ligand/IonIRON/SULFUR CLUSTER
3UNX2Ligand/IonUNKNOWN ATOM OR ION
4WCC2Ligand/IonFE(3)-NI(1)-S(4) CLUSTER

(-) Sites  (27, 27)

Asymmetric Unit (27, 27)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:265 , CYS A:300 , CYS A:531 , WCC A:800BINDING SITE FOR RESIDUE FE2 A 801
02AC2SOFTWAREHIS B:265 , CYS B:300 , CYS B:531 , WCC B:800BINDING SITE FOR RESIDUE FE2 B 801
03AC3SOFTWAREHIS C:265 , CYS C:300 , CYS C:531 , WCC C:800BINDING SITE FOR RESIDUE FE2 C 801
04AC4SOFTWAREHIS D:265 , CYS D:300 , CYS D:531 , WCC D:800BINDING SITE FOR RESIDUE FE2 D 801
05AC5SOFTWAREHIS E:265 , CYS E:300 , CYS E:531 , WCC E:800BINDING SITE FOR RESIDUE FE2 E 801
06AC6SOFTWAREHIS F:265 , CYS F:300 , CYS F:531 , WCC F:800BINDING SITE FOR RESIDUE FE2 F 801
07AC7SOFTWARECYS A:41 , GLY A:44 , CYS A:49 , CYS B:41 , GLY B:44 , CYS B:49 , ARG B:51BINDING SITE FOR RESIDUE SF4 A 700
08AC8SOFTWARECYS A:50 , CYS A:53 , CYS A:58 , CYS A:72BINDING SITE FOR RESIDUE SF4 A 750
09AC9SOFTWAREHIS A:265 , CYS A:300 , CYS A:338 , GLY A:450 , CYS A:451 , CYS A:481 , CYS A:531 , SER A:566 , LYS A:568 , FE2 A:801 , UNX A:802BINDING SITE FOR RESIDUE WCC A 800
10BC1SOFTWARECYS A:531 , WCC A:800BINDING SITE FOR RESIDUE UNX A 802
11BC2SOFTWARECYS B:50 , CYS B:53 , CYS B:58 , CYS B:72BINDING SITE FOR RESIDUE SF4 B 750
12BC3SOFTWAREHIS B:265 , CYS B:300 , CYS B:338 , GLY B:450 , CYS B:451 , CYS B:481 , CYS B:531 , SER B:566 , LYS B:568 , FE2 B:801 , UNX B:802BINDING SITE FOR RESIDUE WCC B 800
13BC4SOFTWARECYS B:531 , WCC B:800BINDING SITE FOR RESIDUE UNX B 802
14BC5SOFTWARECYS C:41 , GLY C:44 , CYS C:49 , ARG C:51 , CYS D:41 , CYS D:49BINDING SITE FOR RESIDUE SF4 C 701
15BC6SOFTWARECYS C:50 , CYS C:53 , CYS C:58 , VAL C:71 , CYS C:72BINDING SITE FOR RESIDUE SF4 C 750
16BC7SOFTWAREHIS C:265 , CYS C:300 , CYS C:338 , GLY C:450 , CYS C:451 , CYS C:481 , CYS C:531 , SER C:566 , LYS C:568 , FE2 C:801 , UNX C:802BINDING SITE FOR RESIDUE WCC C 800
17BC8SOFTWARECYS C:531 , WCC C:800BINDING SITE FOR RESIDUE UNX C 802
18BC9SOFTWARECYS D:50 , CYS D:53 , GLY D:56 , CYS D:58 , CYS D:72BINDING SITE FOR RESIDUE SF4 D 750
19CC1SOFTWAREHIS D:265 , CYS D:300 , CYS D:338 , GLY D:450 , CYS D:451 , CYS D:481 , CYS D:531 , SER D:566 , LYS D:568 , FE2 D:801 , UNX D:802BINDING SITE FOR RESIDUE WCC D 800
20CC2SOFTWARECYS D:531 , WCC D:800BINDING SITE FOR RESIDUE UNX D 802
21CC3SOFTWARECYS E:41 , CYS E:49 , CYS F:41 , GLY F:44 , CYS F:49BINDING SITE FOR RESIDUE SF4 E 702
22CC4SOFTWARECYS E:50 , CYS E:53 , GLY E:56 , CYS E:58 , CYS E:72BINDING SITE FOR RESIDUE SF4 E 750
23CC5SOFTWAREHIS E:265 , CYS E:300 , CYS E:338 , GLY E:450 , CYS E:451 , CYS E:481 , CYS E:531 , SER E:566 , LYS E:568 , FE2 E:801 , UNX E:802BINDING SITE FOR RESIDUE WCC E 800
24CC6SOFTWARECYS E:531 , WCC E:800BINDING SITE FOR RESIDUE UNX E 802
25CC7SOFTWARECYS F:50 , CYS F:53 , CYS F:58 , CYS F:72BINDING SITE FOR RESIDUE SF4 F 750
26CC8SOFTWAREHIS F:265 , CYS F:300 , CYS F:338 , GLY F:450 , CYS F:451 , CYS F:481 , CYS F:531 , SER F:566 , LYS F:568 , FE2 F:801 , UNX F:802BINDING SITE FOR RESIDUE WCC F 800
27CC9SOFTWARECYS F:531 , WCC F:800BINDING SITE FOR RESIDUE UNX F 802

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1JQK)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Gln A:38 -Pro A:39
2Gly A:56 -Pro A:57
3Gln B:38 -Pro B:39
4Gly B:56 -Pro B:57
5Gln C:38 -Pro C:39
6Gly C:56 -Pro C:57
7Gln D:38 -Pro D:39
8Gly D:56 -Pro D:57
9Gln E:38 -Pro E:39
10Gly E:56 -Pro E:57
11Gln F:38 -Pro F:39
12Gly F:56 -Pro F:57

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1JQK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1JQK)

(-) Exons   (0, 0)

(no "Exon" information available for 1JQK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:610
 aligned with COOS_RHORU | P31896 from UniProtKB/Swiss-Prot  Length:639

    Alignment length:610
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
           COOS_RHORU    28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
               SCOP domains d1jqka_ A: Ni-containing carbon monoxide dehydrogenase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -----------------------------------1jqkA03 A:63-237  [code=1.20.1270.30, no name defined]                                                                                                                         1jqkA02 A:238-406  [code=3.40.50.2030, no name defined]                                                                                                                  --1jqkA01 A:409-636  [code=3.40.50.2030, no name defined]                                                                                                                                                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhh.ee.......ee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh.......hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........eeeeeee..hhhhhhhhhhhhhhh.hhhhhh....eeeeeeehhhhhhhhhhh...eee.....hhhhhh....eeee.......hhhhhhhh...eeee..........ee...hhhhhhhhhhhhhhhhhhhhh.............eeeee..hhhhhhhhhhh.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........eeeee...hhhhhhhhhhhhhhhh........eeeee....hhhhhhhhhhhhhhh.eeee........hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jqk A  28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637


Chain B from PDB  Type:PROTEIN  Length:610
 aligned with COOS_RHORU | P31896 from UniProtKB/Swiss-Prot  Length:639

    Alignment length:610
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
           COOS_RHORU    28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
               SCOP domains d1jqkb_ B: Ni-containing carbon monoxide dehydrogenase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -----------------------------------1jqkB03 B:63-237  [code=1.20.1270.30, no name defined]                                                                                                                         1jqkB02 B:238-406  [code=3.40.50.2030, no name defined]                                                                                                                  --1jqkB01 B:409-636  [code=3.40.50.2030, no name defined]                                                                                                                                                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhh.ee.......ee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhh.............hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhh...eeeeeee..hhhhhhhhhhhhhhh...........eeeeeeehhhhhhhhhhh...eee.....hhhhhh....eeee.......hhhhhhhh...eeee..........ee...hhhhhhhhhhhhhhhhhhhhh.............eeeee..hhhhhhhhhhh.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhh.eeeeehhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........eee.....hhhhhhhhhhhhhhhh..hhhhh.eeeee....hhhhhhhhhhhhhhh.eeee........hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jqk B  28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637


Chain C from PDB  Type:PROTEIN  Length:610
 aligned with COOS_RHORU | P31896 from UniProtKB/Swiss-Prot  Length:639

    Alignment length:610
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
           COOS_RHORU    28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
               SCOP domains d1jqkc_ C: Ni-containing carbon monoxide dehydrogenase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -----------------------------------1jqkC03 C:63-237  [code=1.20.1270.30, no name defined]                                                                                                                         1jqkC02 C:238-406  [code=3.40.50.2030, no name defined]                                                                                                                  --1jqkC01 C:409-636  [code=3.40.50.2030, no name defined]                                                                                                                                                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhh.ee.......ee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhh...eeeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhh...eee.....hhhhhh....eeee.......hhhhhhhh...eeee..........ee...hhhhhhhhhhhhhhhhhhhhh.............eeeee..hhhhhhhhhhh.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhh.eeeeehhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........eee.....hhhhhhhhhhhhhhhh..hhhhh.eeeee....hhhhhhhhhhhhhhh.eeee........hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jqk C  28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637


Chain D from PDB  Type:PROTEIN  Length:610
 aligned with COOS_RHORU | P31896 from UniProtKB/Swiss-Prot  Length:639

    Alignment length:610
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
           COOS_RHORU    28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
               SCOP domains d1jqkd_ D: Ni-containing carbon monoxide dehydrogenase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -----------------------------------1jqkD03 D:63-237  [code=1.20.1270.30, no name defined]                                                                                                                         1jqkD02 D:238-406  [code=3.40.50.2030, no name defined]                                                                                                                  --1jqkD01 D:409-636  [code=3.40.50.2030, no name defined]                                                                                                                                                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhh.ee.......ee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh........hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........eeeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhh...eee.....hhhhhh....eeee.......hhhhhhhh...eeee..........ee...hhhhhhhhhhhhhhhhhhhhh.............eeeee..hhhhhhhhhhh.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhh.eeeeehhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........eee.....hhhhhhhhhhhhhhhh..hhhhh.eeeee....hhhhhhhhhhhhhhh.eeee........hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jqk D  28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637


Chain E from PDB  Type:PROTEIN  Length:610
 aligned with COOS_RHORU | P31896 from UniProtKB/Swiss-Prot  Length:639

    Alignment length:610
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
           COOS_RHORU    28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
               SCOP domains d1jqke_ E: Ni-containing carbon monoxide dehydrogenase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -----------------------------------1jqkE03 E:63-237  [code=1.20.1270.30, no name defined]                                                                                                                         1jqkE02 E:238-406  [code=3.40.50.2030, no name defined]                                                                                                                  --1jqkE01 E:409-636  [code=3.40.50.2030, no name defined]                                                                                                                                                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhh.ee.......ee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhh...eeeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhh...eee.....hhhhhh....eeee.......hhhhhhhh...eeee..........ee...hhhhhhhhhhhhhhhhhhhhh.............eeeee..hhhhhhhhhhh.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhh.eeeeehhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........eee.....hhhhhhhhhhhhhhhh..hhhhh.eeeee....hhhhhhhhhhhhhhh.eeee........hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jqk E  28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637


Chain F from PDB  Type:PROTEIN  Length:610
 aligned with COOS_RHORU | P31896 from UniProtKB/Swiss-Prot  Length:639

    Alignment length:610
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
           COOS_RHORU    28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
               SCOP domains d1jqkf_ F: Ni-containing carbon monoxide dehydrogenase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -----------------------------------1jqkF03 F:63-237  [code=1.20.1270.30, no name defined]                                                                                                                         1jqkF02 F:238-406  [code=3.40.50.2030, no name defined]                                                                                                                  --1jqkF01 F:409-636  [code=3.40.50.2030, no name defined]                                                                                                                                                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhh.ee.......ee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhh...eeeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhh...eee.....hhhhhh....eeee.......hhhhhhhh...eeee..........ee...hhhhhhhhhhhhhhhhhhhhh.............eeeee..hhhhhhhhhhh.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........eeeee...hhhhhhhhhhhhhhhh........eeeee....hhhhhhhhhhhhhhh.eeee........hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jqk F  28 ETAWHRYEKQQPQCGFGSAGLCCRICLKGPCRIDPFGEGPKYGVCGADRDTIVARHLVRMIAAGTAAHSEHGRHIALAMQHISQGELHDYSIRDEAKLYAIAKTLGVATEGRGLLAIVGDLAAITLGDFQNQDYDKPCAWLAASLTPRRVKRLGDLGLLPHNIDASVAQTMSRTHVGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDVQCIMPSLPRIAECFHTQIITTDKHNKISGATHVPFDEHKAVETAKTIIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSAEAVVAALAKVNADDPLKPLVDNVVNGNIQGIVLFVGCNTTKVQQDSAYVDLAKSLAKRNVLVLATGCAAGAFAKAGLMTSEATTQYAGEGLKGVLSAIGTAAGLGGPLPLVMHMGSCVDNSRAVALATALANKLGVDLSDLPLVASAPECMSEKALAIGSWAVTIGLPTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIVDTDPKSAGDKLYAAIQERRAGL 637
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (2, 18)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: [code=3.40.50.2030, no name defined] (25)
(-)
Rhodospirillum rubrum. Organism_taxid: 1085. (1)
1a1jqkA02A:238-406
1b1jqkB02B:238-406
1c1jqkE01E:409-636
1d1jqkF01F:409-636
1e1jqkC02C:238-406
1f1jqkD02D:238-406
1g1jqkE02E:238-406
1h1jqkF02F:238-406
1i1jqkA01A:409-636
1j1jqkB01B:409-636
1k1jqkC01C:409-636
1l1jqkD01D:409-636
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1JQK)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (COOS_RHORU | P31896)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0018492    carbon-monoxide dehydrogenase (acceptor) activity    Catalysis of the reaction: CO + H2O + acceptor = CO2 + reduced acceptor.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016151    nickel cation binding    Interacting selectively and non-covalently with nickel (Ni) cations.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0006091    generation of precursor metabolites and energy    The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  1jqk
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  COOS_RHORU | P31896
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  1.2.99.2
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 Related Entries

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