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Title | CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT | |
PDB code | 1UBD (PDB summary) | |
NDB code | PDT038 (NDB atlas) | |
Duplex length | 20 base pairs | |
Protein | Yin and yang 1 (YY1), Transcription factor, DNA binding domain: Cys2-His2 zinc finger |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.074 | |
Straight line (x-axis) | 1.084 | |
Arc | 0.831 | Radius of curvature: r = 298 Å |
Kinked line | 0.414 | Kink angle: alpha = 12° Lengths of straight segments: l1 = 6 bp, l2 = 14 bp |
Double kinked line | 0.179 | Kink angles: alpha1 = 16°, alpha2 = 10° Twist angle: omega = 176° Lengths of straight segments: l1 = 7 bp, l2 = 7 bp, l3 = 6 bp |