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(-) Description

Title :  CRYO-EM RECONSTRUCTION OF NEISSERIA GONORRHOEAE TYPE IV PILUS
 
Authors :  F. Wang, A. Orlova, T. Altindal, L. Craig, E. H. Egelman
Date :  24 May 17  (Deposition) - 12 Jul 17  (Release) - 12 Jul 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  5.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U
Keywords :  Melted Helix, Type Iv Pili, Protein Fibril (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Wang, M. Coureuil, T. Osinski, A. Orlova, T. Altindal, G. Gesbert, X. Nassif, E. H. Egelman, L. Craig
Cryo-Electron Microscopy Reconstructions Of The Pseudomonas Aeruginosa And Neisseria Gonorrhoeae Type Iv Pili At Sub-Nanometer Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - FIMBRIAL PROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U
    Mutation: YES
    Organism Scientific: NEISSERIA GONORRHOEAE
    Organism Taxid: 485
    Strain: C30
    Synonym: TYPE IV PILIN, MS11 ANTIGEN, PILIN

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRSTU

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 63)

Asymmetric/Biological Unit (3, 63)
No.NameCountTypeFull Name
1B6D21Ligand/Ion2,4-BIS(ACETYLAMINO)-2,4,6-TRIDEOXY-BETA-D-GLUCOPYRANOSE
2GLA21Ligand/IonALPHA D-GALACTOSE
3OPE21Ligand/IonPHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER

(-) Sites  (22, 22)

Asymmetric Unit (22, 22)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:68 , SER A:69binding site for residue OPE A 203
02AC2SOFTWARETYR A:50 , LYS A:56 , GLU A:59 , THR A:62 , SER A:63binding site for Poly-Saccharide residues GLA A 201 through DT6 A 202 bound to SER A 63
03AC3SOFTWARETYR B:50 , LYS B:56 , GLU B:59 , THR B:62 , SER B:63binding site for Poly-Saccharide residues GLA B 201 through DT6 B 202 bound to SER B 63
04AC4SOFTWARETYR C:50 , LYS C:56 , GLU C:59 , THR C:62 , SER C:63binding site for Poly-Saccharide residues GLA C 201 through DT6 C 202 bound to SER C 63
05AC5SOFTWARETYR D:50 , LYS D:56 , GLU D:59 , THR D:62 , SER D:63binding site for Poly-Saccharide residues GLA D 201 through DT6 D 202 bound to SER D 63
06AC6SOFTWARETYR E:50 , LYS E:56 , GLU E:59 , THR E:62 , SER E:63binding site for Poly-Saccharide residues GLA E 201 through DT6 E 202 bound to SER E 63
07AC7SOFTWARETYR F:50 , LYS F:56 , GLU F:59 , THR F:62 , SER F:63binding site for Poly-Saccharide residues GLA F 201 through DT6 F 202 bound to SER F 63
08AC8SOFTWARETYR G:50 , LYS G:56 , GLU G:59 , THR G:62 , SER G:63binding site for Poly-Saccharide residues GLA G 201 through DT6 G 202 bound to SER G 63
09AC9SOFTWARETYR H:50 , LYS H:56 , GLU H:59 , THR H:62 , SER H:63binding site for Poly-Saccharide residues GLA H 201 through DT6 H 202 bound to SER H 63
10AD1SOFTWARETYR I:50 , LYS I:56 , GLU I:59 , THR I:62 , SER I:63binding site for Poly-Saccharide residues GLA I 201 through DT6 I 202 bound to SER I 63
11AD2SOFTWARETYR J:50 , LYS J:56 , GLU J:59 , THR J:62 , SER J:63binding site for Poly-Saccharide residues GLA J 201 through DT6 J 202 bound to SER J 63
12AD3SOFTWARETYR K:50 , LYS K:56 , GLU K:59 , THR K:62 , SER K:63binding site for Poly-Saccharide residues GLA K 201 through DT6 K 202 bound to SER K 63
13AD4SOFTWARETYR L:50 , LYS L:56 , GLU L:59 , THR L:62 , SER L:63binding site for Poly-Saccharide residues GLA L 201 through DT6 L 202 bound to SER L 63
14AD5SOFTWARETYR M:50 , LYS M:56 , GLU M:59 , THR M:62 , SER M:63binding site for Poly-Saccharide residues GLA M 201 through DT6 M 202 bound to SER M 63
15AD6SOFTWARETYR N:50 , LYS N:56 , GLU N:59 , THR N:62 , SER N:63binding site for Poly-Saccharide residues GLA N 201 through DT6 N 202 bound to SER N 63
16AD7SOFTWARETYR O:50 , LYS O:56 , GLU O:59 , THR O:62 , SER O:63binding site for Poly-Saccharide residues GLA O 201 through DT6 O 202 bound to SER O 63
17AD8SOFTWARETYR P:50 , LYS P:56 , GLU P:59 , THR P:62 , SER P:63binding site for Poly-Saccharide residues GLA P 201 through DT6 P 202 bound to SER P 63
18AD9SOFTWARETYR Q:50 , LYS Q:56 , GLU Q:59 , THR Q:62 , SER Q:63binding site for Poly-Saccharide residues GLA Q 201 through DT6 Q 202 bound to SER Q 63
19AE1SOFTWARETYR R:50 , LYS R:56 , GLU R:59 , THR R:62 , SER R:63binding site for Poly-Saccharide residues GLA R 201 through DT6 R 202 bound to SER R 63
20AE2SOFTWARETYR S:50 , LYS S:56 , GLU S:59 , THR S:62 , SER S:63binding site for Poly-Saccharide residues GLA S 201 through DT6 S 202 bound to SER S 63
21AE3SOFTWARETYR T:50 , LYS T:56 , GLU T:59 , THR T:62 , SER T:63binding site for Poly-Saccharide residues GLA T 201 through DT6 T 202 bound to SER T 63
22AE4SOFTWARETYR U:50 , LYS U:56 , GLU U:59 , THR U:62 , SER U:63binding site for Poly-Saccharide residues GLA U 201 through DT6 U 202 bound to SER U 63

(-) SS Bonds  (21, 21)

Asymmetric/Biological Unit
No.Residues
1A:121 -A:151
2B:121 -B:151
3C:121 -C:151
4D:121 -D:151
5E:121 -E:151
6F:121 -F:151
7G:121 -G:151
8H:121 -H:151
9I:121 -I:151
10J:121 -J:151
11K:121 -K:151
12L:121 -L:151
13M:121 -M:151
14N:121 -N:151
15O:121 -O:151
16P:121 -P:151
17Q:121 -Q:151
18R:121 -R:151
19S:121 -S:151
20T:121 -T:151
21U:121 -U:151

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5VXX)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5VXX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5VXX)

(-) Exons   (0, 0)

(no "Exon" information available for 5VXX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx A   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain B from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx B   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain C from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx C   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain D from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx D   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain E from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx E   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain F from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx F   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain G from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx G   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain H from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx H   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain I from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx I   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain J from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx J   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain K from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx K   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain L from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx L   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain M from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx M   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain N from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx N   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain O from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx O   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain P from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx P   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain Q from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx Q   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain R from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx R   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain S from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx S   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain T from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx T   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain U from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh............eeeeeee..eeeeee............eeeee..ee..ee..eee..eee.....eee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vxx U   1 FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFD 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
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        FMM1_NEIGO | P02974: 1ay2 2hi2 2hil 2pil

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