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(-) Description

Title :  E. COLI QUINOL FUMARATE REDUCTASE FRDA E245Q MUTATION
 
Authors :  C. A. Starbird, E. Maklashina, P. Sharma, S. Qualls-Histed, G. Cecchin T. M. Iverson
Date :  05 May 17  (Deposition) - 21 Jun 17  (Release) - 28 Jun 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  4.22
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Quinol Fumarate Reductase, Fumarate Reduction, Membrane Protein, Complex Ii Superfamily, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. A. Starbird, E. Maklashina, P. Sharma, S. Qualls-Histed, G. Cecchini, T. M. Iverson
Structural And Biochemical Analyses Reveal Insights Into Covalent Flavinylation Of The Escherichia Coli Complex Ii Homolog Quinol:Fumarate Reductase.
J. Biol. Chem. 2017
PubMed-ID: 28615448  |  Reference-DOI: 10.1074/JBC.M117.795120

(-) Compounds

Molecule 1 - FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT
    Chains: A, E
    EC Number: 1.3.5.4
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FRDA, B4154, JW4115
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI (STRAIN K12)
    Organism Taxid: 83333
    Strain: K12
 
Molecule 2 - FUMARATE REDUCTASE IRON-SULFUR SUBUNIT
    Chains: B, F
    EC Number: 1.3.5.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FRDB, Z5760, ECS5134
    Organism Taxid: 83334
 
Molecule 3 - FUMARATE REDUCTASE SUBUNIT C
    Chains: C, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FRDC, B4152, JW4113
    Organism Scientific: ESCHERICHIA COLI (STRAIN K12)
    Organism Taxid: 83333
    Strain: K12
    Synonym: FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN
 
Molecule 4 - FUMARATE REDUCTASE SUBUNIT D
    Chains: D, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FRDD, B4151, JW4112
    Organism Scientific: ESCHERICHIA COLI (STRAIN K12)
    Organism Taxid: 83333
    Strain: K12
    Synonym: FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABCD    
Biological Unit 2 (1x):     EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 8)

Asymmetric Unit (4, 8)
No.NameCountTypeFull Name
1F3S2Ligand/IonFE3-S4 CLUSTER
2FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4SF42Ligand/IonIRON/SULFUR CLUSTER
Biological Unit 1 (4, 4)
No.NameCountTypeFull Name
1F3S1Ligand/IonFE3-S4 CLUSTER
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4SF41Ligand/IonIRON/SULFUR CLUSTER
Biological Unit 2 (4, 4)
No.NameCountTypeFull Name
1F3S1Ligand/IonFE3-S4 CLUSTER
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4SF41Ligand/IonIRON/SULFUR CLUSTER

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:11 , ALA A:12 , GLY A:13 , GLY A:14 , ALA A:15 , SER A:36 , LYS A:37 , VAL A:38 , SER A:43 , HIS A:44 , THR A:45 , ALA A:47 , ALA A:48 , GLY A:50 , GLY A:51 , HIS A:155 , VAL A:157 , ALA A:191 , THR A:192 , GLY A:193 , THR A:203 , ASP A:211 , LEU A:242 , HIS A:355 , TYR A:356 , GLU A:379 , SER A:393 , ASN A:394 , SER A:395 , LEU A:396 , LEU A:399binding site for residue FAD A 601
2AC2SOFTWARESER B:56 , CYS B:57 , ARG B:58 , ALA B:60 , ILE B:61 , CYS B:62 , GLY B:63 , CYS B:65 , CYS B:77binding site for residue FES B 301
3AC3SOFTWARECYS B:158 , CYS B:204 , THR B:205 , PHE B:206 , VAL B:207 , GLY B:208 , TYR B:209 , CYS B:210 , ALA B:221 , ILE B:224binding site for residue F3S B 302
4AC4SOFTWARECYS B:148 , ILE B:149 , CYS B:151 , GLY B:152 , LEU B:153 , CYS B:154 , ALA B:171 , CYS B:214 , PRO B:215 , VAL B:218binding site for residue SF4 B 303
5AC5SOFTWAREGLY E:11 , ALA E:12 , GLY E:13 , GLY E:14 , ALA E:15 , SER E:36 , LYS E:37 , VAL E:38 , SER E:43 , HIS E:44 , THR E:45 , ALA E:47 , ALA E:48 , GLU E:49 , GLY E:50 , GLY E:51 , HIS E:155 , VAL E:157 , ALA E:191 , THR E:192 , GLY E:193 , THR E:203 , ASP E:211 , LEU E:242 , HIS E:355 , TYR E:356 , GLY E:378 , GLU E:379 , ARG E:390 , SER E:393 , ASN E:394 , SER E:395 , LEU E:396 , LEU E:399binding site for residue FAD E 601
6AC6SOFTWARECYS F:57 , ARG F:58 , ALA F:60 , ILE F:61 , CYS F:62 , GLY F:63 , CYS F:65 , CYS F:77binding site for residue FES F 301
7AC7SOFTWARECYS F:158 , CYS F:204 , THR F:205 , PHE F:206 , VAL F:207 , GLY F:208 , TYR F:209 , CYS F:210 , ALA F:221binding site for residue F3S F 302
8AC8SOFTWARECYS F:148 , ILE F:149 , CYS F:151 , GLY F:152 , LEU F:153 , CYS F:154 , CYS F:214binding site for residue SF4 F 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5VPN)

(-) Cis Peptide Bonds  (7, 7)

Asymmetric Unit
No.Residues
1Gly A:269 -Pro A:270
2Asn C:65 -Pro C:66
3Gly C:104 -Pro C:105
4Gly E:269 -Pro E:270
5Gly E:582 -Glu E:583
6Asn G:65 -Pro G:66
7Gly G:104 -Pro G:105

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5VPN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5VPN)

(-) Exons   (0, 0)

(no "Exon" information available for 5VPN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:577
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee..eeee..hhhhhhhhhhhhhhh....eeee...hhhhhhhhhh...ee.......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.............ee.........ee....hhhhhhhhhhhhhhh....eeee..eeeeeeeee..eeeeeeeee....eeeeee...eee....hhhhh..........hhhhhhhhhh...ee....eeeeeee.........hhhhhh..eee.....hhhhhh..............hhhhhhhhhhhhhhhhhhhh...........eeee....hhhhhhh.hhhhhhhhhhhh........eeeeeeeeee..eee...........eee....ee..........hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhh.......................eeeeeee.....eeeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn A   0 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGILMTQGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPA 576
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       


Chain B from PDB  Type:PROTEIN  Length:243
                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee.........eeeeeeeee....hhhhhhhhhhhhh..................eeee..eeee....hhhhhh..eeeee.....eee..ee.hhhhhhhhhhh.........hhhhh....hhhhhhhhhhhhh....hhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhh..hhhhh...hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn B   1 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR 243
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240   


Chain C from PDB  Type:PROTEIN  Length:130
                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn C   1 TTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVILFVALYW 130
                                    10        20        30        40        50        60        70        80        90       100       110       120       130


Chain D from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn D   0 MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI 118
                                     9        19        29        39        49        59        69        79        89        99       109         


Chain E from PDB  Type:PROTEIN  Length:585
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee..eeee..hhhhhhhhhhhhhhh....eeee...hhhhhhhhhh...ee.......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.............ee.........ee....hhhhhhhhhhhhhhh....eeee..eeeeeeeee..eeeeeeeee.....eeeee...eee....hhhhh..........hhhhhhhhh....ee....eeee............hhhhhh..eee.....hhhhhhh.............hhhhhhhhhhhhhhhhhhhhh..eee..eeeeeee....hhhhhhhhhhhhhhhhhhhh........eee..eeeee..eee...........eee....ee...........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..eehhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhh.......ee..............eeeeeee.....eeeeeee................. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn E   0 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGILMTQGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEA 584
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579     


Chain F from PDB  Type:PROTEIN  Length:243
                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee.........eeeeeeeee....hhhhhhhhhhhhh..................eeee..eeee....hhhhhh..eeee.....eeee..ee.hhhhhhhhhhh.........hhhhh....hhhhhhhhhhhhh....hhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhh..hhhhh...hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn F   1 AEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR 243
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240   


Chain G from PDB  Type:PROTEIN  Length:130
                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn G   1 TTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVILFVALYW 130
                                    10        20        30        40        50        60        70        80        90       100       110       120       130


Chain H from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 5vpn H   0 MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI 118
                                     9        19        29        39        49        59        69        79        89        99       109
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5VPN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5VPN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5VPN)

(-) Gene Ontology  (28, 47)

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Access by UniProt ID/Accession number
  FRDA_ECOLI | P00363
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  FRDB_ECO57 | P0AC49
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  FRDC_ECOLI | P0A8Q0
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  FRDD_ECOLI | P0A8Q3
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FRDA_ECOLI | P00363: 1kf6 1kfy 1l0v 2b76 3cir 3p4p 3p4q 3p4r 3p4s 4kx6
        FRDB_ECO57 | P0AC49: 2b76
        FRDC_ECOLI | P0A8Q0: 1kf6 1kfy 1l0v 2b76 3cir 3p4p 3p4q 3p4r 3p4s
        FRDD_ECOLI | P0A8Q3: 1kf6 1kfy 1l0v 2b76 3cir 3p4p 3p4q 3p4r 3p4s 4kx6

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5VPN)