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(-) Description

Title :  CLOSED STATE CRYOEM RECONSTRUCTION OF HSP104:ATPYS AND FITC CASEIN
 
Authors :  S. N. Gates, A. L. Yokom, J. -B. Lin, M. E. Jackrel, A. N. Rizo, N. M. Kendse C. E. Buell, E. A. Sweeny, E. Chuang, M. P. Torrente, K. L. Mack, M. Su, J. D. R. Southworth
Date :  19 Apr 17  (Deposition) - 05 Jul 17  (Release) - 05 Jul 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  4.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,P
Keywords :  Hsp104, Cryoem, Aaa+, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. N. Gates, A. L. Yokom, J. Lin, M. E. Jackrel, A. N. Rizo, N. M. Kendsersky, C. E. Buell, E. A. Sweeny, K. L. Mack, E. Chuang, M. P. Torrente, M. Su, J. Shorter, D. R. Southworth
Ratchet-Like Polypeptide Translocation Mechanism Of The Aaa Disaggregase Hsp104.
Science 2017
PubMed-ID: 28619716  |  Reference-DOI: 10.1126/SCIENCE.AAN1052

(-) Compounds

Molecule 1 - HEAT SHOCK PROTEIN 104
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI K-12
    Expression System Strain: K-12
    Expression System Taxid: 83333
    Gene: HSP104, YLL026W, L0948
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: PROTEIN AGGREGATION-REMODELING FACTOR HSP104
 
Molecule 2 - FITC CASEIN
    Chains: P
    Organism Common: BOVINE
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Other Details: PROTEIN WAS PURCHASED FROM SIGMA-ALDRICH. PURIFIED FROM BOVINE MILK

 Structural Features

(-) Chains, Units

  1234567
Asymmetric/Biological Unit : ABCDEFP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 38)

Asymmetric/Biological Unit (2, 38)
No.NameCountTypeFull Name
1AGS12Ligand/IonPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2UNK26Mod. Amino Acid

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:184 , PRO A:185 , VAL A:186 , ILE A:187 , PRO A:214 , GLY A:215 , ILE A:216 , GLY A:217 , LYS A:218 , THR A:219 , ALA A:220 , ILE A:351 , PRO A:389 , LEU A:393 , ARG F:333binding site for residue AGS A 1001
02AC2SOFTWAREVAL A:580 , VAL A:581 , GLY A:617 , SER A:618 , GLY A:619 , LYS A:620 , THR A:621 , GLU A:622 , ILE A:783 , ALA A:825 , ARG A:826 , ASN A:829binding site for residue AGS A 1002
03AC3SOFTWAREARG A:307 , ARG A:333 , ARG A:334 , PRO B:185 , VAL B:186 , ILE B:187 , ARG B:189 , GLY B:215 , ILE B:216 , GLY B:217 , LYS B:218 , THR B:219 , ALA B:220 , ILE B:351 , LEU B:355 , PRO B:389 , ASP B:390 , LEU B:393binding site for residue AGS B 1001
04AC4SOFTWAREGLU B:579 , VAL B:580 , VAL B:581 , SER B:616 , GLY B:617 , SER B:618 , GLY B:619 , LYS B:620 , THR B:621 , GLU B:622 , LEU B:775 , ILE B:783 , ALA B:825 , ASN B:829binding site for residue AGS B 1002
05AC5SOFTWAREARG B:334 , ASP C:184 , PRO C:185 , VAL C:186 , ILE C:187 , ARG C:189 , PRO C:214 , ILE C:216 , GLY C:217 , LYS C:218 , THR C:219 , ALA C:220 , ILE C:351 , PRO C:389 , LEU C:393binding site for residue AGS B 1003
06AC6SOFTWAREARG B:765 , GLU C:579 , VAL C:580 , VAL C:581 , GLY C:617 , SER C:618 , GLY C:619 , LYS C:620 , THR C:621 , GLU C:622 , ASN C:728 , LEU C:775 , ARG C:787 , ALA C:825 , ASN C:829binding site for residue AGS C 1001
07AC7SOFTWAREARG C:765 , GLU D:579 , VAL D:580 , VAL D:581 , SER D:616 , GLY D:617 , SER D:618 , GLY D:619 , LYS D:620 , THR D:621 , GLU D:622 , LEU D:775 , ARG D:787 , ALA D:825 , ARG D:826 , ASN D:829binding site for residue AGS D 1001
08AC8SOFTWAREARG D:765 , GLU E:579 , VAL E:580 , VAL E:581 , SER E:616 , GLY E:617 , SER E:618 , GLY E:619 , LYS E:620 , THR E:621 , GLU E:622 , LEU E:775 , ARG E:787 , ALA E:825 , ASN E:829binding site for residue AGS E 1001
09AC9SOFTWAREARG E:333 , PRO F:185 , VAL F:186 , ILE F:187 , PRO F:214 , GLY F:215 , ILE F:216 , GLY F:217 , LYS F:218 , THR F:219 , ALA F:220 , ILE F:351binding site for residue AGS F 1001
10AD1SOFTWAREGLU E:761 , ARG E:765 , VAL F:580 , VAL F:581 , LEU F:615 , SER F:616 , GLY F:617 , SER F:618 , GLY F:619 , LYS F:620 , THR F:621 , GLU F:622 , LEU F:775 , ILE F:783 , ARG F:787 , ALA F:825 , ARG F:826 , ASN F:829binding site for residue AGS F 1002
11AD2SOFTWAREARG C:202 , ILE C:204 , SER C:206 , ASN C:207 , LEU C:305 , GLY C:308 , GLY C:329 , ALA C:330 , PHE C:331 , GLU C:332 , ARG C:334 , PHE C:335 , GLY D:215 , ARG D:386 , ASP D:390 , ASP D:394binding site for Di-peptide LYS C 205 and ARG C 333
12AD3SOFTWAREGLU B:326 , LYS B:327 , ARG C:322 , SER C:323 , ILE C:324 , VAL C:325 , LYS C:327 , ASP C:328 , THR C:658 , TYR C:665 , GLU C:667 , SER C:710 , GLY C:711 , GLY C:713 , ARG D:322 , ILE D:324 , VAL D:325 , LYS D:327 , ASP D:328 , TYR D:665 , GLU D:667 , SER D:710 , GLY D:711 , GLY D:713 , LYS D:714 , ASP E:666 , LYS E:714binding site for Di-peptide GLU C 326 and GLN D 712
13AD4SOFTWAREASN C:207 , SER C:306 , ALA C:330 , PHE C:331 , GLU C:332 , ARG C:333 , PHE C:335 , PRO D:185 , VAL D:186 , ILE D:187 , ARG D:189 , GLY D:215 , ILE D:216 , GLY D:217 , LYS D:218 , THR D:219 , ALA D:220 , ILE D:351 , PRO D:389 , LEU D:393binding site for Di-peptide AGS C 1002 and ARG C 334
14AD5SOFTWARELYS D:205 , GLY D:329 , ALA D:330 , PHE D:331 , GLU D:332 , ARG D:334 , PHE D:335 , VAL E:186 , ILE E:187 , GLY E:215 , ILE E:216 , GLY E:217 , LYS E:218 , THR E:219 , ALA E:220 , ILE E:351 , LEU E:355 , PRO E:389 , ASP E:390 , LEU E:393binding site for Di-peptide AGS D 1002 and ARG D 333
15AD6SOFTWARELYS D:327 , THR E:658 , ALA E:660 , GLY E:664 , ASP E:666 , GLU E:667 , SER E:710 , GLY E:711 , GLY E:713 , LYS E:714binding site for Di-peptide TYR E 665 and GLN E 712
16AD7SOFTWAREGLY C:661 , TYR C:662 , THR D:659 , GLY D:661 , TYR D:662 , SER E:647 , GLU E:648 , LYS E:649 , ALA E:651 , VAL E:652 , SER E:653 , LYS E:654 , THR E:659 , ALA E:660 , GLY E:661 , VAL E:663 , GLY E:664 , SER F:647 , GLU F:648 , LYS F:649 , ALA F:651 , VAL F:652 , SER F:653 , LYS F:654binding site for Di-peptide TYR F 650 and TYR E 662

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1F:718 -F:721

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5VJH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5VJH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5VJH)

(-) Exons   (0, 0)

(no "Exon" information available for 5VJH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:579
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeehhhhhhh........hhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhh...hhhhh..eeeeehhhhhhh.....hhhhhhhhhhhhhhhh....eeeee.hhhhhh...hhhhh...hhhhhh....eeeeehhhhhhhhhhh.hhhhhhheeee....hhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.ee..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhh.eeeee.......hhhhhhhh.............hhhhhh.....eeeeehhhhhhhhhhhhhhhhhh.................eeeeee..hhhhhh.......hhhhhhhhhhhhhhhh.hhhhhh..eeeee...hhhhhhhhhhhhhhhhhhhh......eee...hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh......eeeee...eee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vjh A 165 EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLEECLEVLPNHE 884
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404     ||541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       875         
                                                                                                                                                                                                                                                                               410|                                                                                                                                                                                                                                                                                                                              859|          
                                                                                                                                                                                                                                                                                538                                                                                                                                                                                                                                                                                                                               874          


Chain B from PDB  Type:PROTEIN  Length:579
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeehhhhhhh........hhhhhhhhhhhhh......eeee.....hhhhhhhhhhhhhhhh..hhhhh..eeeee.hhhhhh.....hhhhhhhhhhhhhhhh....eeeee.hhhhhhh..hhhhh...hhhhhhh..eeeeeehhhhhhhhhhhhhhhhhhheeee....hhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........eeeeee.....hhhhhhhhhhhhhhhhhhhheeee.hhhhhhhhhhhhhh...............hhhhhh...eeeeehhhhhhhhhhhhhhhhhh.................eeeeee..hhhhhh.........hhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhhhh......eee...hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh......eeeee...eee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vjh B 165 EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLEECLEVLPNHE 884
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404     ||541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       875         
                                                                                                                                                                                                                                                                               410|                                                                                                                                                                                                                                                                                                                              859|          
                                                                                                                                                                                                                                                                                538                                                                                                                                                                                                                                                                                                                               874          


Chain C from PDB  Type:PROTEIN  Length:579
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeehhhhhhh........hhhhhhhhhhhhh......eeeee....hhhhhhhhhhhhhhh..........eeeee.hhhhhh.....hhhhhhhhhhhhhhhh....eeeee.hhhhhhh..hhhhh..hhhhhhh....eeeeeehhhhhhhhhhhhhhhhhheeee....hhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh........eeeeee.....hhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhh............hhhhhhh.....eeee.hhhhh...hhhhhhhhh..................eeeee...hhhhhh.........hhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhhh..............hhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh........eee...eee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vjh C 165 EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLEECLEVLPNHE 884
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404     ||541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       875         
                                                                                                                                                                                                                                                                               410|                                                                                                                                                                                                                                                                                                                              859|          
                                                                                                                                                                                                                                                                                538                                                                                                                                                                                                                                                                                                                               874          


Chain D from PDB  Type:PROTEIN  Length:579
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeehhhhhhh........hhhhhhhhhhhhh......eeeee....hhhhhhhhhhhhhhh..........eeeee.hhhhhh.....hhhhhhhhhhhhhhhh....eeeee.hhhhhhh..hhhhh..hhhhhhh....eeeeeehhhhhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh........eeeeee.....hhhhhhhhhhhhhhhhhhhheeee.hhhhhhhhhhhhhh............hhhhhhh.....eeeeehhhhhhhhhhhhhhhhh..................eeeeee..hhhhhh.........hhhhhhhhhhhh..hhhhhh...eeee....hhhhhhhhhhhhhhhhhhh.......eee...hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh......eeeee...eee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vjh D 165 EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLEECLEVLPNHE 884
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404     ||541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       875         
                                                                                                                                                                                                                                                                               410|                                                                                                                                                                                                                                                                                                                              859|          
                                                                                                                                                                                                                                                                                538                                                                                                                                                                                                                                                                                                                               874          


Chain E from PDB  Type:PROTEIN  Length:579
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeehhhhhhh........hhhhhhhhhhhhhh.....eeeee....hhhhhhhhhhhhhhh...hhhhh..eeeee.hhhhhh.....hhhhhhhhhhhhhhhh....eeeeee.hhhhhh..hhhhh..hhhhhhh....eeeeeehhhhhhhhhhhhhhhhhheeeee...hhhhhhhhhhhhhhhhhhhhheeehhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh........eeeeee.....hhhhhhhhhhhhhhhhhhhheeehhhhhhhhhhhhhhhh............hhhhhhh.....eeee.hhhhhhhhhhhhhhhhh..................eeeeee..hhhhhh.........hhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhhhhhhhh.......eee...hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh......eeeee...eee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vjh E 165 EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLEECLEVLPNHE 884
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404     ||541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       875         
                                                                                                                                                                                                                                                                               410|                                                                                                                                                                                                                                                                                                                              859|          
                                                                                                                                                                                                                                                                                538                                                                                                                                                                                                                                                                                                                               874          


Chain F from PDB  Type:PROTEIN  Length:564
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhheeehhhhhhh........hhhhhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhhhh.........eeeeehhhhhhhh....hhhhhhhhhhhhhhhh....eeeee.hhhhhhh...hhhhhhhhhhhhh....eeeeeehhhhhhhhhhh.hhhhheeeee....hhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.........eeeee.....hhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhh..hhhhhh...eeee.hhhhhhhhhhhhhhhhhh....ee...ee......eeeeee..hhhhhh.........hhhhhhhhhhh...hhhhhh...eeee....hhhhhhhhhhhhhhhhhhhh......eee.hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh......eeeee...eee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5vjh F 165 EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLEECLEVLPNHE 884
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404     ||541       551       561       571       581       591       601       611       621       631       641       651   ||  676       686       696       706       716       726       736       746       756       766       776       786       796       806       816       826       836       846       856  ||   880    
                                                                                                                                                                                                                                                                               410|                                                                                                                  655|                                                                                                                                                                                         859|          
                                                                                                                                                                                                                                                                                538                                                                                                                   671                                                                                                                                                                                          874          


Chain P from PDB  Type:PROTEIN  Length:26
                                                          
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author .......................... Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
                 Transcript -------------------------- Transcript
                 5vjh P   1 xxxxxxxxxxxxxxxxxxxxxxxxxx  26
                            ||||||||10||||||||20||||||
                            1-UNK|||10-UNK|||19-UNK|||
                             2-UNK|||11-UNK|||20-UNK||
                              3-UNK|| 12-UNK|| 21-UNK|
                               4-UNK|  13-UNK|  22-UNK
                                5-UNK   14-UNK   23-UNK
                                 6-UNK   15-UNK   24-UNK
                                  7-UNK   16-UNK   25-UNK
                                   8-UNK   17-UNK   26-UNK
                                    9-UNK   18-UNK
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

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(-) Gene Ontology  (18, 18)

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  HS104_YEAST | P31539
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HS104_YEAST | P31539: 5kne 5u2u 5vy8 5vya

(-) Related Entries Specified in the PDB File

5vy8
5vy9 RELATED ID: EMD-8744 RELATED DB: EMDB RELATED ID: EMD-8745 RELATED DB: EMDB RELATED ID: EMD-8746 RELATED DB: EMDB
5vya