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(-)Asym./Biol. Unit
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(-) Description

Title :  CRYSTAL STRUCTURE OF CURK DEHYDRATASE H996F INACTIVE MUTANT
 
Authors :  G. J. Dodge, J. L. Smith
Date :  21 Nov 16  (Deposition) - 11 Jan 17  (Release) - 11 Jan 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.43
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Dehydratase, Curacin, Polyketide Synthase, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. D. Fiers, G. J. Dodge, D. H. Sherman, J. L. Smith, C. C. Aldrich
Vinylogous Dehydration By A Polyketide Dehydratase Domain I Curacin Biosynthesis.
J. Am. Chem. Soc. V. 138 16024 2016
PubMed-ID: 27960309  |  Reference-DOI: 10.1021/JACS.6B09748

(-) Compounds

Molecule 1 - CURK
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)PRARE AI
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: LYNGBM3L_74450
    Mutation: YES
    Organism Scientific: MOOREA PRODUCENS 3L
    Organism Taxid: 489825
    Synonym: POLYKETIDE SYNTHASE MODULE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5TZ5)

(-) Sites  (0, 0)

(no "Site" information available for 5TZ5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5TZ5)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Ser A:989 -Pro A:990
2Ser B:989 -Pro B:990
3Glu B:1056 -Asn B:1057

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5TZ5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5TZ5)

(-) Exons   (0, 0)

(no "Exon" information available for 5TZ5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:281
                                                                                                                                                                                                                                                                                                                          
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee........eeeeeeee....hhhhh.eee..eee.hhhhhhhhhhhhhhhh.....eeeeeeeee....ee.....eeeeeeeeeee..eeeeeeeeee.....eeeeeeeeeee.........hhhhhhhhh.ee.hhhhhhhhhhhh.eee.hhhh.eeeeee...eeeeeee.......hhhhh..hhhhhhhhhhhhhhhhh.......eeeeeeeeeeee......eeeeeee.......eeeeee.....eeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5tz5 A  962 LHPLLGEKLNLARIENQHHFQSYLTAESPAYLSQFQVFNKVLFPATGYLEIAAAVGKNLLTTGEQVVVSDVTIVRGLVIPETDIKTVQTVISTLENNSYKLEIFSTSEANQWTLHAEGKIFLDSTTNTKAKIDLEQYQRECSQVIDIQQHYQQFKSRGIDYGNSFQGIKQLWKGQGKALGKIALPEEIAGQATDYQLHPALLDAALQILGHAIGNTETDDKAYLPVGIDKLKQYRQTITQVWAIVEIPENTLKGSIKLVDNQGSLLAEIEGLRVTATTADA 1247
                                   971       981       991      1001      1011      1021      1031      1041      1051      1061      1076      1086      1096      1106      1116      1126      1136      1146      1156      1166      1176      1186      1196      1206      1216      1226      1236      1246 
                                                                                                                                    1069|                                                                                                                                                                            
                                                                                                                                     1075                                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:279
                                                                                                                                                                                                                                                                                                                        
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee........eeeeeeee....hhhhh.eee..eee.hhhhhhhhhhhhhhhhh....eeeeeeeee....ee.....eeeeeeeeee...eeeeeeeee......eeeeeeeeeee....hhhhhhhhh.ee.hhhhhhhhhhhh.eee.hhhh.eeeeeee..eeeeeee.hhhhhhhhhhh..hhhhhhhhhhhhhhhhh.......eeeeeeeeeeee......eeeeeee......eeeeeee.....eeeeeeeeeeeeehhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5tz5 B  962 LHPLLGEKLNLARIENQHHFQSYLTAESPAYLSQFQVFNKVLFPATGYLEIAAAVGKNLLTTGEQVVVSDVTIVRGLVIPETDIKTVQTVISTLENNSYKLEIFSTSEGNQWTLHAEGKIFLDKAKIDLEQYQRECSQVIDIQQHYQQFKSRGIDYGNSFQGIKQLWKGQGKALGKIALPEEIAGQATDYQLHPALLDAALQILGHAIGNTETDDKAYLPVGIDKLKQYRQTITQVWAIVEIPENTLKGSIKLVDNQGSLLAEIEGLRVTATTADALLK 1250
                                   971       981       991      1001      1011      1021      1031      1041      1051      1061      1076      1086  ||  1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241         
                                                                                                                                     1070|         1089|                                                                                                                                                           
                                                                                                                                      1076          1095
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5TZ5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5TZ5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5TZ5)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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  Sites
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  Cis Peptide Bonds
    Glu B:1056 - Asn B:1057   [ RasMol ]  
    Ser A:989 - Pro A:990   [ RasMol ]  
    Ser B:989 - Pro B:990   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        F4Y425_9CYAN | F4Y425: 4myz 5dp1 5tz7

(-) Related Entries Specified in the PDB File

5tz6 5tz7