5LSL - JenaLib

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Title :   CRYSTAL STRUCTURE OF YEAST HSH49P IN COMPLEX WITH CUS1P BINDING DOMAIN.

Authors :   A. M. Van Roon, E. Obayashi, B. Sposito, C. Oubridge, K. Nagai

Date :   02 Sep 16 (Deposition) - 12 Apr 17 (Release) - 24 May 17 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.65

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,E  (1x)
Biol. Unit 2: B,F  (1x)
Biol. Unit 3: C,G  (1x)
Biol. Unit 4: D,H  (1x)

Keywords :   Splicing, U2 Snrnp, Sf3B Complex, Rna Binding Domain (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. M. Van Roon, C. Oubridge, E. Obayashi, B. Sposito, A. J. Newman, B. Seraphin, K. Nagai
Crystal Structure Of U2 Snrnp Sf3B Components: Hsh49P In Complex With Cus1P-Binding Domain.
Rna V. 23 968 2017
PubMed-ID: 28348170 | Reference-DOI: 10.1261/RNA.059378.116

Molecule 1 - PROTEIN HSH49
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PRK-172
	Expression System Taxid	:	469008
	Expression System Variant	:	PLYSS
	Expression System Vector Type	:	PLASMID
	Gene	:	HSH49, YOR319W, O6142
	Organism Common	:	BAKER'S YEAST
	Organism Scientific	:	SACCHAROMYCES CEREVISIAE
	Organism Taxid	:	4932

Molecule 2 - COLD SENSITIVE U2 SNRNA SUPPRESSOR 1
	Chains	:	E, F, H, G
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PRK-172
	Expression System Taxid	:	469008
	Expression System Variant	:	PLYSS
	Expression System Vector Type	:	PLASMID
	Gene	:	CUS1, YMR240C, YM9408.02C
	Organism Common	:	BAKER'S YEAST
	Organism Scientific	:	SACCHAROMYCES CEREVISIAE
	Organism Taxid	:	4932

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A				E
Biological Unit 2 (1x)	:		B				F
Biological Unit 3 (1x)	:			C				G
Biological Unit 4 (1x)	:				D				H

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 5LSL)

(no "Site" information available for 5LSL)

(no "SS Bond" information available for 5LSL)

(no "Cis Peptide Bond" information available for 5LSL)

(no "SAP(SNP)/Variant" information available for 5LSL)

(no "PROSITE Motif" information available for 5LSL)

(no "Exon" information available for 5LSL)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee......hhhhhhhhhh....eeeee..ee....ee..eeeeee.hhhhhhhhhhhhh...ee..ee.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5lsl A   8 GNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQV  86
                                    17        27        37        47        57        67        77

Chain B from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee......hhhhhhhhhh....eeeee..ee....ee..eeeeee.hhhhhhhhhhhhh...ee..ee.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5lsl B   8 GNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQV  86
                                    17        27        37        47        57        67        77

Chain C from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee......hhhhhhhhhh....eeeee..ee....ee..eeeeee.hhhhhhhhhhhhh...ee..ee.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5lsl C   8 GNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQV  86
                                    17        27        37        47        57        67        77

Chain D from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee......hhhhhhhhhh....eeeee..ee....ee..eeeeee.hhhhhhhhhhhhh...ee..ee.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5lsl D   8 GNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQV  86
                                    17        27        37        47        57        67        77

Chain E from PDB  Type:PROTEIN  Length:62
                                                                                              
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhh........hhhhhhhhh.......eee.....hhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                 5lsl E 289 SRPGRISQELRAIMNLPEGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIP 350
                                   298       308       318       328       338       348

Chain F from PDB  Type:PROTEIN  Length:62
                                                                                              
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhh.......hhhhhhhhh.......eee.....hhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                 5lsl F 288 GSRPGRISQELRAIMNLPGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIP 350
                                   297       308       318       328       338       348  
                                           305|                                           
                                            307

Chain G from PDB  Type:PROTEIN  Length:62
                                                                                              
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhh........hhhhhhhhh.......eee.....hhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                 5lsl G 289 SRPGRISQELRAIMNLPEGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIP 350
                                   298       308       318       328       338       348

Chain H from PDB  Type:PROTEIN  Length:62
                                                                                              
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhh........hhhhhhhhh.......eee.....hhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                 5lsl H 289 SRPGRISQELRAIMNLPEGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIP 350
                                   298       308       318       328       338       348

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	HSH49_YEAST \| Q99181
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	CUS1_YEAST \| Q02554	:	5gm6 5lsb
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5lsb	5LSB CONTAINS THE INTACT HSH49 PROTEIN WHEREAS THIS ENTRY ONLY HAS RRM1 OF HSH49P IN COMPLEX WITH CUS1(290-368).

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