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(-) Description

Title :  CRYSTAL STRUCTURE OF TYR24 PHOSPHORYLATED ANNEXIN A2 AT 2.9 A RESOLUTION
 
Authors :  P. Ecsedi, G. Gogl, B. Kiss, L. Nyitray
Date :  15 Aug 16  (Deposition) - 05 Jul 17  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Calcium Binding Protein, Tyrosine Phosphorylation (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. Ecsedi, B. Kiss, G. Gogl, L. Radnai, L. Buday, K. Koprivanacz, K. Liliom, I. Leveles, B. Vertessy, N. Jeszenoi, C. Hetenyi, G. Schlosser, G. Katona, L. Nyitray
Regulation Of The Equilibrium Between Closed And Open Conformations Of Annexin A2 By N-Terminal Phosphorylation And S100A4-Binding.
Structure 2017
PubMed-ID: 28669632  |  Reference-DOI: 10.1016/J.STR.2017.06.001

(-) Compounds

Molecule 1 - ANNEXIN A2
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneANXA2, ANX2, ANX2L4, CAL1H, LPC2D
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymANNEXIN II,ANNEXIN-2,CALPACTIN I HEAVY CHAIN,CALPACTIN-1 HEAVY CHAIN,CHROMOBINDIN-8,LIPOCORTIN II,PLACENTAL ANTICOAGULANT PROTEIN IV,PAP-IV,PROTEIN I,P36

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1CA6Ligand/IonCALCIUM ION
2PTR2Mod. Amino AcidO-PHOSPHOTYROSINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2PTR1Mod. Amino AcidO-PHOSPHOTYROSINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2PTR1Mod. Amino AcidO-PHOSPHOTYROSINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:234 , MET A:278 , GLY A:280 , GLY A:282 , ASP A:322binding site for residue CA A 401
2AC2SOFTWAREGLY A:202 , ARG A:205 , LYS A:206 , GLY A:207 , GLU A:247binding site for residue CA A 402
3AC3SOFTWARELYS A:88 , LEU A:91 , GLU A:96 , GLN A:141binding site for residue CA A 403
4AC4SOFTWAREGLY B:202 , ARG B:205 , GLY B:207 , GLU B:247binding site for residue CA B 401
5AC5SOFTWARESER B:234 , MET B:278 , GLY B:280 , GLY B:282 , ASP B:322binding site for residue CA B 402
6AC6SOFTWAREGLY B:50 , VAL B:51 , GLU B:53 , HOH B:502binding site for residue CA B 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5LQ0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5LQ0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5LQ0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5LQ0)

(-) Exons   (0, 0)

(no "Exon" information available for 5LQ0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:317
                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5lq0 A  23 AyGSVKAYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339
                             |      32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       
                             |                                                                                                                                                                                                                                                                                                                           
                            24-PTR                                                                                                                                                                                                                                                                                                                       

Chain B from PDB  Type:PROTEIN  Length:314
                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5lq0 B  21 PSAyGSVKAYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339
                               |    30        40        50        60        70        80        90       100       110       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335    
                              24-PTR                                                                                       118|                                                                                                                                                                                                                       
                                                                                                                            124                                                                                                                                                                                                                       

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5LQ0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5LQ0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5LQ0)

(-) Gene Ontology  (64, 64)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANXA2_HUMAN | P073551w7b 1xjl 2hyu 2hyv 2hyw 4drw 4ftg 4hrh 5lpu 5lpx 5lq2

(-) Related Entries Specified in the PDB File

5lpu