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(-) Description

Title :  HUMAN HISTIDINE TRIAD NUCLEOTIDE BINDING PROTEIN 1 (HHINT1) 2'-DEOXY-AMP COMPLEX
 
Authors :  K. M. Maize, B. C. Finzel
Date :  26 Jun 16  (Deposition) - 28 Jun 17  (Release) - 28 Jun 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Hint, Histidine Triad, Hit, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Maize, K.
Structural Biology For Drug Design: Applications In Two Systems
Thesis, University Of 2016 Minnesota Digital Conservancy
PubMed: search

(-) Compounds

Molecule 1 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1
    ChainsA
    EC Number3.-.-.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPMCSG7
    Expression System StrainROSETTA 2 PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneHINT1, HINT
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymADENOSINE 5'-MONOPHOSPHORAMIDASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1D5M1Ligand/Ion2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1D5M2Ligand/Ion2'-DEOXYADENOSINE-5'-MONOPHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:19 , LYS A:25 , GLU A:34 , HIS A:42 , ASP A:43 , ILE A:44 , LEU A:53 , ASN A:99 , GLY A:105 , GLN A:106 , SER A:107 , VAL A:108 , HIS A:112 , HIS A:114 , HOH A:325 , HOH A:339 , HOH A:363 , HOH A:367binding site for residue D5M A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5KM7)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Trp A:123 -Pro A:124

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KM7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KM7)

(-) Exons   (0, 0)

(no "Exon" information available for 5KM7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:113
                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee..hhhhhh.......eeeee......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 5km7 A  14 GGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
                                    23        33        43        53        63        73        83        93       103       113       123   

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KM7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5KM7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5KM7)

(-) Gene Ontology  (17, 17)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HINT1_HUMAN | P497731av5 1kpa 1kpb 1kpc 1kpe 1kpf 3tw2 4eqe 4eqg 4eqh 4zkl 4zkv 5ed3 5ed6 5emt 5i2e 5i2f 5ipb 5ipc 5ipd 5ipe 5kly 5klz 5km0 5km1 5km2 5km3 5km4 5km6 5kma 5kmb 5kmc 5o8g 5o8i

(-) Related Entries Specified in the PDB File

3tw2 5ipb 5ipc 5ipd 5ipe 5kly 5klz 5km0 5km1 5km2 5km3 5km4 5km5 5km6 5km8 5km9 5kma 5kmb 5kmc