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(-) Description

Title :  HUMAN HISTIDINE TRIAD NUCLEOTIDE BINDING PROTEIN 1 (HHINT1)-COPPER COMPLEX
 
Authors :  K. M. Maize, J. C. Nix, B. C. Finzel
Date :  06 Nov 15  (Deposition) - 09 Nov 16  (Release) - 09 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Hint, Histidine Triad, Hit, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Shah, T. -F. Chou, K. M. Maize, B. C. Finzel, C. R. Wagner
Copper Induced Irreversible Inactivation Of Human Histidine Triad Nucleotide Binding Protein1 (Hhint1)
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1
    Chains: A, B
    EC Number: 3.-.-.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: ROSETTA 2 PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: HINT1, HINT, PKCI1, PRKCNH1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ADENOSINE 5'-MONOPHOSPHORAMIDASE,PROTEIN KINASE C INHIBITOR 1,PROTEIN KINASE C-INTERACTING PROTEIN 1,PKCI-1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 7)

Asymmetric/Biological Unit (1, 7)
No.NameCountTypeFull Name
1CU7Ligand/IonCOPPER (II) ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:14 , HIS A:59 , HIS A:110binding site for residue CU A 201
2AC2SOFTWAREHIS A:122 , HOH A:349binding site for residue CU A 202
3AC3SOFTWAREHIS A:112 , HIS A:114 , HOH A:398binding site for residue CU A 203
4AC4SOFTWAREGLY A:15 , ASP A:16 , HIS A:59 , HOH A:309 , HOH A:414binding site for residue CU A 204
5AC5SOFTWAREASN B:99 , GLN B:106 , SER B:107 , HIS B:112 , HIS B:114binding site for residue CU B 201
6AC6SOFTWAREHIS B:122 , HOH B:328binding site for residue CU B 202
7AC7SOFTWAREHIS B:59 , HIS B:110 , HOH B:316binding site for residue CU B 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EMT)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Trp A:123 -Pro A:124
2Trp B:123 -Pro B:124

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EMT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EMT)

(-) Exons   (0, 0)

(no "Exon" information available for 5EMT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:116
                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeehhhhh.......eeeee......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 5emt A  11 ARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
                                    20        30        40        50        60        70        80        90       100       110       120      


Chain B from PDB  Type:PROTEIN  Length:112
                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeehhhhh.......eeeee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 5emt B  15 GDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
                                    24        34        44        54        64        74        84        94       104       114       124
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EMT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EMT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EMT)

(-) Gene Ontology  (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)

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  5emt
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  HINT1_HUMAN | P49773
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  3.-.-.-
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HINT1_HUMAN | P49773: 1av5 1kpa 1kpb 1kpc 1kpe 1kpf 3tw2 4eqe 4eqg 4eqh 4zkl 4zkv 5ed3 5ed6 5i2e 5i2f 5ipb 5ipc 5ipd 5ipe 5kly 5klz 5km0 5km1 5km2 5km3 5km4 5km6 5km7 5kma 5kmb 5kmc 5o8g 5o8i

(-) Related Entries Specified in the PDB File

1av5 THE SAME PROTEIN COMPLEXED WITH PHOSPHOMETHYLPHOSPHOIC ACID ADENOSYL ESTER IN A P212121 SPACEGROUP
1kpa APO PROTEIN IN A P212121 SPACEGROUP
1kpb APO PROTEIN IN A P212121 SPACEGROUP
1kpc APO PROTEIN IN A P21 SPACEGROUP
1kpe THE SAME PROTEIN COVALENTLY BONDED TO ADENOSINE 5' DITUNGSTATE IN A P212121 SPACEGROUP
3tw2 THE SAME PROTEIN COMPLEXED WITH AMP IN A C2 SPACEGROUP