5JRH - JenaLib

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Title :   CRYSTAL STRUCTURE OF SALMONELLA ENTERICA ACETYL-COA SYNTHETASE (ACS) IN COMPLEX WITH CAMP AND COENZYME A

Authors :   L. Shen, Y. Zhang

Date :   06 May 16 (Deposition) - 21 Dec 16 (Release) - 21 Dec 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.64

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Acetyl-Coenzyme A Synthetase, Camp, Amp-Forming, Acetyl-Coenzyme A, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   X. Han, L. Shen, Q. Wang, X. Cen, J. Wang, M. Wu, P. Li, W. Zhao, Y. Zhang, G. Zhao
Cyclic Amp Inhibits The Activity And Promotes The Acetylation Of Acetyl-Coa Synthetase Through Competitive Binding To The Atp/Amp Pocket
J. Biol. Chem. 2016
PubMed: search | Reference-DOI: 10.1074/JBC.M116.753640

Molecule 1 - ACETYL-COENZYME A SYNTHETASE
	Chains	:	A, B
	EC Number	:	6.2.1.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Gene	:	ACS, STM4275
	Organism Scientific	:	SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / ATCC 700720)
	Organism Taxid	:	99287
	Strain	:	LT2 / SGSC1412 / ATCC 700720
	Synonym	:	ACS,ACETATE--COA LIGASE,ACYL-ACTIVATING ENZYME

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 10)

No.	Name	Count	Type	Full Name
1	BU3	4	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
2	CMP	2	Ligand/Ion	ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
3	COA	2	Ligand/Ion	COENZYME A
4	MG	2	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (3, 4)

No.	Name	Count	Type	Full Name
1	BU3	2	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
2	CMP	1	Ligand/Ion	ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
3	COA	1	Ligand/Ion	COENZYME A
4	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 2 (3, 4)

No.	Name	Count	Type	Full Name
1	BU3	2	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
2	CMP	1	Ligand/Ion	ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
3	COA	1	Ligand/Ion	COENZYME A
4	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (10, 10)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PHE A:163 , GLY A:164 , GLY A:165 , ARG A:191 , ASP A:306 , SER A:523 , HIS A:525 , ARG A:584 , PRO A:589 , HOH A:802 , HOH A:867 , HOH A:1031 , ARG B:194	binding site for residue COA A 701
02	AC2	SOFTWARE	GLY A:387 , GLU A:388 , PRO A:389 , ASP A:411 , THR A:412 , TRP A:413 , TRP A:414 , GLN A:415 , THR A:416 , ASP A:500 , ILE A:512 , ARG A:515 , ASN A:521 , ARG A:526 , HOH A:851 , HOH A:876 , HOH A:907 , HOH A:990 , HOH A:1109	binding site for residue CMP A 702
03	AC3	SOFTWARE	VAL A:537 , HIS A:539 , ILE A:542 , HOH A:1008 , HOH A:1141	binding site for residue MG A 703
04	AC4	SOFTWARE	GLY A:173 , ARG A:174 , LYS A:270 , PRO A:271 , HOH A:912	binding site for residue BU3 A 704
05	AC5	SOFTWARE	TRP A:97 , LYS A:106 , PRO A:143 , GLU A:144 , LEU A:220 , LYS A:221 , HOH A:881	binding site for residue BU3 A 705
06	AC6	SOFTWARE	ARG A:194 , PHE B:163 , GLY B:164 , GLY B:165 , ARG B:191 , ILE B:196 , ASP B:306 , ASN B:335 , PRO B:589 , HOH B:816 , HOH B:847 , HOH B:1019 , HOH B:1203	binding site for residue COA B 701
07	AC7	SOFTWARE	GLY B:387 , GLU B:388 , PRO B:389 , ASP B:411 , THR B:412 , TRP B:413 , TRP B:414 , GLN B:415 , THR B:416 , ASP B:500 , ILE B:512 , ARG B:515 , ASN B:521 , ARG B:526 , HOH B:883 , HOH B:905 , HOH B:948 , HOH B:1077	binding site for residue CMP B 702
08	AC8	SOFTWARE	VAL B:537 , HIS B:539 , ILE B:542 , HOH B:1142 , HOH B:1225 , HOH B:1261	binding site for residue MG B 703
09	AC9	SOFTWARE	GLY B:173 , ASP B:177 , TYR B:263 , LYS B:270 , PRO B:271 , HOH B:999	binding site for residue BU3 B 704
10	AD1	SOFTWARE	TRP B:97 , LYS B:106 , PRO B:143 , GLU B:144	binding site for residue BU3 B 705

(no "SS Bond" information available for 5JRH)

Asymmetric Unit

No.	Residues
1	Trp A:336	-	Pro A:337
2	Trp B:336	-	Pro B:337

(no "SAP(SNP)/Variant" information available for 5JRH)

(no "PROSITE Motif" information available for 5JRH)

(no "Exon" information available for 5JRH)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:640
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeee......eeee....eehhhhhhh..hhhhhh..eeeeee......eeeeehhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhhh..eeeee..eee..eeehhhhhhhhhhh........eeeee.............eeehhhhhhhh........ee...eeeeeee.......eeeeeehhhhhhhhhhhhhhhh......eeee.....hhhhhhh.hhhhhhh..eeeee.........hhhhhhhhhhh..eeeehhhhhhhhhhhhhhhh.........eeeee....hhhhhhhhhhhh......eeee..hhhhh..........................eeee..........eeeeeee.........ee..hhhhhhhhhhh.....eeeeeeeee.....eeeeee...eeee..eeeehhhhhhhhhh...eeeeeeeeeee...eeeeeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeee............hhhhhhhhhhh...........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jrh A   5 HKHAIPANIADRCLINPEQYETKYKQSINDPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDLGDTSTLADPGVVEKLLEEKQA 647
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       627       637       647
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   622|                     
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    626

Chain B from PDB  Type:PROTEIN  Length:639
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeee..eeeeee....eehhhhhhh..hhhhhh..eeeeee......eeeeehhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhhh..eeeee..eee..eeehhhhhhhhhhh........eeeee.............eeehhhhhhhh........ee...eeeeeee.......eeeeeehhhhhhhhhhhhhhhh......eeee.....hhhhhhh.hhhhhhh..eeeee.........hhhhhhhhhhh..eeeehhhhhhhhhhhhhhhh.........eeeee....hhhhhhhhhhhh......eeee..hhhhh..........................eeee..........eeeeeee.........ee..hhhhhhhhhhh.....eeeeeeeee.....eeeeee...eeee..eeeehhhhhhhhhh...eeeeeeeeeee...eeeeeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeee............hhhhhhhhhhh.............hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jrh B   6 KHAIPANIADRCLINPEQYETKYKQSINDPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEE 644
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635

Legend:		→ Mismatch	(orange background)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 5JRH)

(no "CATH Domain" information available for 5JRH)

(no "Pfam Domain" information available for 5JRH)

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	Cis Peptide Bonds
		Trp A:336 - Pro A:337	[ RasMol ]
		Trp B:336 - Pro B:337	[ RasMol ]

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Description

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Chains, Units

Ligands, Modified Residues, Ions (4, 10)

Sites (10, 10)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

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