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(-) Description

Title :  CRYSTAL STRUCTURE OF MOUSE LOW-MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE TYPE A (LMPTP-A) COMPLEXED WITH PHOSPHATE
 
Authors :  S. M. Stanford, A. E. Aleshin, R. C. Liddington, L. Bankston, G. Cadwell N. Bottini
Date :  30 Apr 16  (Deposition) - 29 Mar 17  (Release) - 24 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.54
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Protein Tyrosine Phosphatase, Hydrolase, Lmw-Ptp, Lmptp (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Stanford, A. E. Aleshin, V. Zhang, R. J. Ardecky, M. P. Hedrick, J. Zou, S. R. Ganji, M. R. Bliss, F. Yamamoto, A. A. Bobkov, J. Kiselar, Y. Liu, G. W. Cadwell, S. Khare, J. Yu, A. Barquilla, T. D. Y. Chung, T. Mustelin, S. Schenk, L. A. Bankston, R. C. Liddington, A. B. Pinkerton, N. Bottini
Diabetes Reversal By Inhibition Of The Low-Molecular-Weight Tyrosine Phosphatase.
Nat. Chem. Biol. V. 13 624 2017
PubMed-ID: 28346406  |  Reference-DOI: 10.1038/NCHEMBIO.2344

(-) Compounds

Molecule 1 - LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE
    Chains: A, B
    EC Number: 3.1.3.48
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-4T
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: ACP1
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: LMW-PTPASE,LOW MOLECULAR WEIGHT CYTOSOLIC ACID PHOSPHATASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS B:12 , LEU B:13 , GLY B:14 , ASN B:15 , ILE B:16 , CYS B:17 , ARG B:18 , ASP B:129binding site for residue PO4 B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JNU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JNU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JNU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JNU)

(-) Exons   (0, 0)

(no "Exon" information available for 5JNU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:153
                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee....hhhhhhhhhhhhhhhhh.hhh.eeeeeee..........hhhhhhhhhhh...........hhhhhhhh.eeee.hhhhhhhhhhhhh.......eeee.hhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jnu A   4 GSKSVLFVCLGNICRSPIAEAVFRKLVTDEKVSDNWRIDSAATSTYEVGNPPDYRGQNCMRKHGIHMQHIARQITKEDFATFDYILCMDESNLRDLNRKSNQVKNCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLEKT 156
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153   


Chain B from PDB  Type:PROTEIN  Length:153
                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee....hhhhhhhhhhhhhhhhh.hhh.eeeeeee..........hhhhhhhhhhh.............hhhhhh.eeee.hhhhhhhhhhhhh.......eeee.hhhh.............hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jnu B   4 GSKSVLFVCLGNICRSPIAEAVFRKLVTDEKVSDNWRIDSAATSTYEVGNPPDYRGQNCMRKHGIHMQHIARQITKEDFATFDYILCMDESNLRDLNRKSNQVKNCKAKIELLGSYDPQKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLEKT 156
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JNU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JNU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JNU)

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PPAC_MOUSE | Q9D358: 2p4u

(-) Related Entries Specified in the PDB File

5jnr 5jns 5jnt 5jnv 5jnw