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(-)Asym./Biol. Unit
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(-) Description

Title :  THE CRYSTAL STRUCTURE OF IUS-SPRY DOMAIN FROM RANBPM/9
 
Authors :  S. K. Hong, K. -H. Kim, E. E. Kim
Date :  22 Apr 16  (Deposition) - 09 Nov 16  (Release) - 09 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Beta Sandwich, Transport Protein, Ran-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. K. Hong, K. H. Kim, E. J. Song, E. E. Kim
Structural Basis For The Interaction Between The Ius-Spry Domain Of Ranbpm And Ddx-4 In Germ Cell Development.
J. Mol. Biol. V. 428 4330 2016
PubMed-ID: 27622290  |  Reference-DOI: 10.1016/J.JMB.2016.09.004

(-) Compounds

Molecule 1 - RAN-BINDING PROTEIN 9
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: MODIFIED PET28A
    Expression System Strain: ROSETTA(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: IUS-SPRY DOMAIN, UNP RESIDUES 108-350
    Gene: RANBP9, RANBPM
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: RANBP9,BPM-L,BPM90,RAN-BINDING PROTEIN M,RANBPM,RANBP7

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5JI9)

(-) Sites  (0, 0)

(no "Site" information available for 5JI9)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JI9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JI9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JI9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JI9)

(-) Exons   (0, 0)

(no "Exon" information available for 5JI9)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.............eeeeee...eeee....eeee.....hhhhheeeee....hhhh.eeeeeeeeeee......eeeee...............eeeee....eeee.....ee.........eeeeeee....eeeeee..eeeeeeee......eeeeee....eeeeee........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ji9 A 141 NEQEKELQRRLKRLYPAVDEQETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREW 345
                                   150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JI9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JI9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JI9)

(-) Gene Ontology  (13, 13)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RANB9_HUMAN | Q96S59: 5ji7 5jiu

(-) Related Entries Specified in the PDB File

5ji7 5jia 5jiu