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Title :   CRYSTAL STRUCTURE OF MOUSE CARM1 IN COMPLEX WITH INHIBITOR SA0707

Authors :   V. Cura, N. Marechal, J. Mailliot, N. Troffer-Charlier, P. Hassenboeh J. M. Wurtz, L. Bonnefond, J. Cavarelli

Date :   15 Mar 16 (Deposition) - 15 Mar 17 (Release) - 15 Mar 17 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.42

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Protein Arginine Methyltransferase, Catalytic Domain, Chromatin Regulator, Mrna Processing, Mrna Splicing, Nucleus, S-Adenosyl-L- Methionine, Transcription, Transcription Regulation, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   V. Cura, N. Marechal, J. Mailliot, N. Troffer-Charlier, J. M. Wurtz, L. Bonnefond, J. Cavarelli
Crystal Structure Of Mouse Carm1 In Complex With Inhibitor Sa0707
To Be Published
PubMed: search

Molecule 1 - HISTONE-ARGININE METHYLTRANSFERASE CARM1
	Chains	:	A, B, C, D
	EC Number	:	2.1.1.319
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Common	:	FALL ARMYWORM
	Expression System Taxid	:	7108
	Gene	:	CARM1, PRMT4
	Organism Common	:	MOUSE
	Organism Scientific	:	MUS MUSCULUS
	Organism Taxid	:	10090
	Synonym	:	COACTIVATOR-ASSOCIATED ARGININE METHYLTRANSFERASE 1,PROTEIN ARGININE N-METHYLTRANSFERASE 4

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (6, 29)

No.	Name	Count	Type	Full Name
1	6D6	4	Ligand/Ion	5'-{[(3S)-3-AMINO-3-CARBOXYPROPYL](3-AMINOPROPYL)AMINO}-5'-DEOXYADENOSINE
2	DXE	3	Ligand/Ion	1,2-DIMETHOXYETHANE
3	EDO	18	Ligand/Ion	1,2-ETHANEDIOL
4	M2M	1	Ligand/Ion	1-METHOXY-2-(2-METHOXYETHOXY)ETHANE
5	PEG	2	Ligand/Ion	DI(HYDROXYETHYL)ETHER
6	PG6	1	Ligand/Ion	1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE

Asymmetric Unit (24, 24)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLN A:149 , EDO A:503	binding site for residue DXE A 501
02	AC2	SOFTWARE	TRP A:404	binding site for residue DXE A 502
03	AC3	SOFTWARE	TYR A:262 , GLU A:267 , HIS A:415 , TRP A:416 , DXE A:501 , 6D6 A:509	binding site for residue EDO A 503
04	AC4	SOFTWARE	THR A:410 , GLU A:411	binding site for residue EDO A 504
05	AC5	SOFTWARE	PHE A:153 , TYR A:156 , GLN A:159 , ASN B:472	binding site for residue EDO A 505
06	AC6	SOFTWARE	LEU A:413	binding site for residue EDO A 506
07	AC7	SOFTWARE	LYS A:463 , SER B:136 , GLU B:245	binding site for residue PG6 A 507
08	AC8	SOFTWARE	ASN A:285 , GLY A:398	binding site for residue PEG A 508
09	AC9	SOFTWARE	TYR A:150 , PHE A:151 , TYR A:154 , GLN A:160 , MET A:163 , ARG A:169 , GLY A:193 , CYS A:194 , ILE A:198 , GLU A:215 , ALA A:216 , GLY A:241 , LYS A:242 , VAL A:243 , GLU A:244 , GLU A:258 , MET A:260 , MET A:269 , SER A:272 , EDO A:503 , HOH A:606 , HOH A:637 , HOH A:650	binding site for residue 6D6 A 509
10	AD1	SOFTWARE	GLY A:329 , ASP A:333 , GLN A:424	binding site for residue M2M A 510
11	AD2	SOFTWARE	ASN B:162 , HIS B:415	binding site for residue DXE B 501
12	AD3	SOFTWARE	PHE B:153 , GLU B:267	binding site for residue EDO B 502
13	AD4	SOFTWARE	HOH B:623	binding site for residue EDO B 503
14	AD5	SOFTWARE	PHE B:375 , GLY B:437	binding site for residue EDO B 504
15	AD6	SOFTWARE	PHE A:428	binding site for residue EDO B 505
16	AD7	SOFTWARE	TYR B:150 , PHE B:151 , TYR B:154 , GLN B:160 , ARG B:169 , GLY B:193 , CYS B:194 , SER B:196 , GLU B:215 , ALA B:216 , GLY B:241 , LYS B:242 , VAL B:243 , GLU B:244 , GLU B:258 , MET B:260 , MET B:269 , SER B:272 , HIS B:415 , HOH B:621 , HOH B:651	binding site for residue 6D6 B 506
17	AD8	SOFTWARE	PHE C:153	binding site for residue EDO C 501
18	AD9	SOFTWARE	GLN C:424	binding site for residue EDO C 502
19	AE1	SOFTWARE	LEU C:280 , LYS C:281 , PRO C:282	binding site for residue EDO C 503
20	AE2	SOFTWARE	TYR C:150 , PHE C:151 , TYR C:154 , GLN C:160 , MET C:163 , ARG C:169 , GLY C:193 , CYS C:194 , ILE C:198 , GLU C:215 , ALA C:216 , GLY C:241 , LYS C:242 , VAL C:243 , GLU C:244 , GLU C:258 , MET C:260 , MET C:269 , SER C:272 , HOH C:607 , HOH C:610 , HOH C:638	binding site for residue 6D6 C 507
21	AE3	SOFTWARE	TRP D:404	binding site for residue EDO D 501
22	AE4	SOFTWARE	LEU D:248 , PRO D:249 , GLN D:251	binding site for residue EDO D 502
23	AE5	SOFTWARE	ARG C:209	binding site for residue EDO D 504
24	AE6	SOFTWARE	TYR D:150 , PHE D:151 , TYR D:154 , GLN D:160 , MET D:163 , ARG D:169 , GLY D:193 , CYS D:194 , SER D:196 , ILE D:198 , LEU D:199 , GLU D:215 , ALA D:216 , GLY D:241 , LYS D:242 , VAL D:243 , GLU D:244 , GLU D:258 , MET D:260 , MET D:269 , SER D:272 , HOH D:616 , HOH D:622	binding site for residue 6D6 D 506

(no "SS Bond" information available for 5ISG)

Asymmetric/Biological Unit

No.	Residues
1	Phe A:287	-	Pro A:288
2	Phe B:287	-	Pro B:288
3	Phe C:287	-	Pro C:288
4	Phe D:287	-	Pro D:288

(no "SAP(SNP)/Variant" information available for 5ISG)

(no "PROSITE Motif" information available for 5ISG)

(no "Exon" information available for 5ISG)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:343
                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeeeee..hhhhhhhhhhhhh.....eeeee...........eeeeee..........hhhhhhhhh...eeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh..eee..hhhhh....eeeeee....hhhhh.eeeeeeeee....eeeeeeeeeeeeeee....eeeee...........eeeeeeeeeeee....eeeeeeeeee.....eeeeeeeee.....eeeeeee....ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5isg A 136 SVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYT 478
                                   145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain B from PDB  Type:PROTEIN  Length:343
                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeeeee..hhhhhhhhhhhhh.....eeeee...........eeeeee.......hhhhhhhhhhhh...eeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..eee..hhhhh....eeeeee....hhhhh.eeeeeeeee....eeeeeeeeeeeeeee....eeeee...........eeeeeeeeeeee....eeeeeeeeeee...eeeeeeeeee.....eeeeeee....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5isg B 135 RSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRY 477
                                   144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474

Chain C from PDB  Type:PROTEIN  Length:343
                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeeeee..hhhhhhhhhhhhh.....eeeee...........eeeeee...........hhhhhhhh...eeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh..eee..hhhhh....eeeeee....hhhhh.eeeeeeeee....eeeeeeeeeeeeeee....eeeee...........eeeeeeeeeeee....eeeeeeeeee.....eeeeeeeee.....eeeeeee....ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5isg C 136 SVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYT 478
                                   145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain D from PDB  Type:PROTEIN  Length:343
                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeeeee..hhhhhhhhhhhhh.....eeeee...........eeeeee..........hhhhhhhhh...eeeeeeee..eeeeeeeee.hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..eee..hhhhh....eeeeee....hhhhh.eeeeeeeee....eeeeeeeeeeeeeee....eeeee...........eeeeeeeeeeee....eeeeeeeeee.....eeeeeeeee.....eeeeeee....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5isg D 135 RSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRY 477
                                   144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474

Legend:		→ Mismatch	(orange background)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 5ISG)

(no "CATH Domain" information available for 5ISG)

(no "Pfam Domain" information available for 5ISG)

Asymmetric/Biological Unit(hide GO term definitions)

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Phe A:287 - Pro A:288	[ RasMol ]
		Phe B:287 - Pro B:288	[ RasMol ]
		Phe C:287 - Pro C:288	[ RasMol ]
		Phe D:287 - Pro D:288	[ RasMol ]

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	5isg
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 29)

Sites (24, 24)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

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