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(-) Description

Title :  CGT STRUCTURE IN DIMER
 
Authors :  H. Zhang, H. Wu
Date :  05 Jan 16  (Deposition) - 31 Aug 16  (Release) - 26 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Glycosyltransferase, Helix Binding Domain, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Zhang, M. Zhou, T. Yang, S. M. Haslam, A. Dell, H. Wu
New Helical Binding Domain Mediates A Glycosyltransferase Activity Of A Bifunctional Protein.
J. Biol. Chem. V. 291 22106 2016
PubMed-ID: 27539847  |  Reference-DOI: 10.1074/JBC.M116.731695

(-) Compounds

Molecule 1 - PUTATIVE GLYCOSYLTRANSFERASE (GALT1)
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'
    Expression System Taxid: 866768
    Fragment: UNP RESIDUES 287-582
    Gene: GALT1, SPAF_1933
    Organism Scientific: STREPTOCOCCUS PARASANGUINIS FW213
    Organism Taxid: 1114965

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5HEC)

(-) Sites  (0, 0)

(no "Site" information available for 5HEC)

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:266 -A:282
2A:267 -A:283
3B:266 -B:282
4B:267 -B:283

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5HEC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HEC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HEC)

(-) Exons   (0, 0)

(no "Exon" information available for 5HEC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:276
                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeee.....hhhhhhhhhhh.....eeeeeee.....hhhhhhhhhhh....eeeee....hhhhhhhhhhhhh...eeee.....ee..hhhhhhhhhhhh....eeeeeeeeee....eee...hhhhh.eeeehhhhhh...hhhhh.....eeee.hhhh..............hhhhhhhhh..eeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5hec A   4 GELISIIVPVYNVEKYLKRCLDSLLRQTYKNFEIILINDGSTDNSSIICEEYAKIDNRIQILHQTNAGPSAARNAGITYASGKYITFVDSDDFVEEFYLEHLYRALVDNGSDISVCNFNSFNEDRQSFLFSITKEKYFCKNYTIAEWMDLNLFLTFTFSPTKLFKAELFEGIRFPLGRLREDDATIYRLYLKASQITFINEGSYYYSQRDDISSMISNAEERIALLASMGYDLTEQIKSYKGRLKKCCEDALRNGQIELYQQCCNKLDLIENYPKE 295
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153|      169       179       189       199       209       229       239       249       259       269       279       289      
                                                                                                                                                                               153|                                                       218|                                                                  
                                                                                                                                                                                160                                                        229                                                                  


Chain B from PDB  Type:PROTEIN  Length:276
                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeee.....hhhhhhhhhhh.....eeeeeee.....hhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhh...eeee.....ee..hhhhhhhhhhhh....eeeeeeeeee....eee...hhhhh.eeeehhhhhh...hhhhhh....eeee.hhhh.........hhhhhhhhhhhhhh..eeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5hec B   4 GELISIIVPVYNVEKYLKRCLDSLLRQTYKNFEIILINDGSTDNSSIICEEYAKIDNRIQILHQTNAGPSAARNAGITYASGKYITFVDSDDFVEEFYLEHLYRALVDNGSDISVCNFNSFNEDRQSFLFSITKEKYFCKNYTIAEWMDLNLFLTFTFSPTKLFKAELFEGIRFPLGRLREDDATIYRLYLKASQITFINEGSYYYSQRDDISSMISNAEERIALLASMGYDLTEQIKSYKGRLKKCCEDALRNGQIELYQQCCNKLDLIENYPKE 295
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153|      169       179       189       199       209       229       239       249       259       269       279       289      
                                                                                                                                                                               153|                                                       218|                                                                  
                                                                                                                                                                                160                                                        229
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HEC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HEC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HEC)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 5hec)
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        I1ZPA1_STRPA | I1ZPA1: 4pfx 4phr 4phs 5hea

(-) Related Entries Specified in the PDB File

5hea