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(-) Description

Title :  SOLUTION STRUCTURE OF LYS33 ACETYLATED HUMAN SUMO2
 
Authors :  M. T. Naik, N. Naik, H. Shih, T. Huang
Date :  19 Jun 16  (Deposition) - 07 Jun 17  (Release) - 07 Jun 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Ubiquitin-Like Protein, Acetylated Protein, Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. T. Naik, N. Naik, H. Shih, T. Huang
Structures Of Human Sumo
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SMALL UBIQUITIN-RELATED MODIFIER 2
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PCDFDUET-1
    Expression System Vector Type: PCDFDUET-1
    Fragment: UNP RESIDUES 1-93
    Gene: SUMO2, SMT3B, SMT3H2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: LYS33 ACETYLATED MATURE SMALL UBIQUITIN-RELATED MODIFIER 2 (SUMO2) RESIDUES 1-14 (MGSSHHHHHHSQDP) REPRESENT A NON- NATIVE PURIFICATION TAG. THESE RESIDUES WERE NEITHER ASSIGNED NOR INCLUDED IN STRUCTURE CALCULATION.
    Other Details - Source: PLASMID PCDF PYLT-1 WITH SUMO INSERT WITH K33STOP MUTATION (WITH AMBER CODON) AND PACKRS-3 AS DESCRIBED IN NEUMANN ET AL., MOL CELL, 36, 153, 2009
    Synonym: SUMO-2,HSMT3,SMT3 HOMOLOG 2,SUMO-3,SENTRIN-2,UBIQUITIN-LIKE PROTEIN SMT3B,SMT3B

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1ALY1Mod. Amino AcidN(6)-ACETYLLYSINE
NMR Structure * (1, 1)
No.NameCountTypeFull Name
1ALY1Mod. Amino AcidN(6)-ACETYLLYSINE

(-) Sites  (0, 0)

(no "Site" information available for 5GHC)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5GHC)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:93
                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeeeee.....eeeeeee....hhhhhhhhhhhhh.....eeeee..ee.....hhhhhh....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  5ghc A  1 MADEKPKEGVKTENNDHINLKVAGQDGSVVQFkIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
                                    10        20        30  |     40        50        60        70        80        90   
                                                           33-ALY
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5GHC)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5GHC)

(-) Gene Ontology  (9, 9)

NMR Structure(hide GO term definitions)

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  SUMO2_HUMAN | P61956
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SUMO2_HUMAN | P61956: 1wm2 1wm3 1wz0 1z5q 2awt 2ckh 2d07 2io0 2io3 2iyd 2n1w 2n9e 2rpq 3uin 3uio 3zo5 4bkg 4npn 5d2m 5elu 5eql 5ghb

(-) Related Entries Specified in the PDB File

2n1w RELATED ID: 25577 RELATED DB: BMRB RELATED ID: 36007 RELATED DB: BMRB
5b7a
5ghb
5ghd