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(-) Description

Title :  CRYSTAL STRUCTURE OF NIPAH VIRUS FUSION GLYCOPROTEIN IN THE PREFUSION STATE
 
Authors :  K. Xu, D. B. Nikolov
Date :  20 Nov 15  (Deposition) - 16 Dec 15  (Release) - 23 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.37
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Keywords :  Fusion Protein, Nipah, Prefusion, Paramyxovirus, Henipavirus, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Xu, Y. P. Chan, B. Bradel-Tretheway, Z. Akyol-Ataman, Y. Zhu, S. Dutta, L. Yan, Y. Feng, L. F. Wang, G. Skiniotis, B. Lee, Z. H. Zhou, C. C. Broder, H. C. Aguilar, D. B. Nikolov
Crystal Structure Of The Pre-Fusion Nipah Virus Fusion Glycoprotein Reveals A Novel Hexamer-Of-Trimers Assembly.
Plos Pathog. V. 11 05322 2015
PubMed-ID: 26646856  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1005322

(-) Compounds

Molecule 1 - FUSION GLYCOPROTEIN F0
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell: EPITHELIA
    Expression System Common: HUMAN
    Expression System Organ: KIDNEY
    Expression System Taxid: 9606
    Mutation: YES
    Organism Scientific: NIPAH VIRUS
    Organism Taxid: 121791
    Synonym: PROTEIN F

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABC   
Biological Unit 2 (1x):    DEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 66)

Asymmetric Unit (4, 66)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2MAN23Ligand/IonALPHA-D-MANNOSE
3MLI6Ligand/IonMALONATE ION
4NAG36Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (4, 33)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2MAN11Ligand/IonALPHA-D-MANNOSE
3MLI3Ligand/IonMALONATE ION
4NAG18Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (3, 33)
No.NameCountTypeFull Name
1BMA-1Ligand/IonBETA-D-MANNOSE
2MAN12Ligand/IonALPHA-D-MANNOSE
3MLI3Ligand/IonMALONATE ION
4NAG18Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREALA A:174 , LEU A:175 , PHE A:235 , ASN A:238 , LEU B:201binding site for residue MLI A 611
02AC2SOFTWARELEU B:175 , PHE B:235 , ASN B:238binding site for residue MLI B 612
03AC3SOFTWAREALA C:174 , LEU C:175 , PHE C:235 , ASN C:238binding site for residue MLI C 610
04AC4SOFTWAREALA D:174 , LEU D:175 , PHE D:235 , ASN D:238binding site for residue MLI D 612
05AC5SOFTWAREALA E:174 , LEU E:175 , PHE E:235 , ASN E:238 , LEU F:201binding site for residue MLI E 610
06AC6SOFTWAREALA F:174 , LEU F:175 , PHE F:235 , ASN F:238binding site for residue MLI F 611
07AC7SOFTWAREGLU A:95 , ASN A:99binding site for Poly-Saccharide residues NAG A 606 through NAG A 607 bound to ASN A 99
08AC8SOFTWAREASN A:414 , GLY A:430 , LYS A:431 , VAL B:118binding site for Poly-Saccharide residues NAG A 601 through MAN A 605 bound to ASN A 414
09AC9SOFTWAREASN A:464 , GLN A:468 , GLN B:459 , MET B:463binding site for Poly-Saccharide residues NAG A 608 through MAN A 610 bound to ASN A 464
10AD1SOFTWAREASN B:99binding site for Poly-Saccharide residues NAG B 604 through MAN B 606 bound to ASN B 99
11AD2SOFTWAREASN B:414 , GLY B:430 , VAL C:118binding site for Poly-Saccharide residues NAG B 601 through MAN B 603 bound to ASN B 414
12AD3SOFTWAREASN B:464 , GLN B:468 , ASP C:304 , GLN C:459binding site for Poly-Saccharide residues NAG B 607 through MAN B 611 bound to ASN B 464
13AD4SOFTWAREGLU C:95 , ASN C:99binding site for Poly-Saccharide residues NAG C 608 through NAG C 609 bound to ASN C 99
14AD5SOFTWAREVAL A:118 , ASN C:414 , GLY C:430 , LYS C:431binding site for Poly-Saccharide residues NAG C 601 through MAN C 605 bound to ASN C 414
15AD6SOFTWAREGLN A:459 , MET A:463 , ASN C:464 , GLN C:468binding site for Poly-Saccharide residues NAG C 606 through NAG C 607 bound to ASN C 464
16AD7SOFTWAREGLU D:95 , ASN D:99binding site for Poly-Saccharide residues NAG D 609 through MAN D 611 bound to ASN D 99
17AD8SOFTWAREASN D:414 , GLY D:430 , LYS D:431binding site for Poly-Saccharide residues NAG D 601 through MAN D 604 bound to ASN D 414
18AD9SOFTWAREASN D:464 , GLN D:468 , SER E:462 , MET E:463 , ASN F:350binding site for Poly-Saccharide residues NAG D 605 through MAN D 608 bound to ASN D 464
19AE1SOFTWAREGLU E:95 , ILE E:96 , ASN E:99binding site for Poly-Saccharide residues NAG E 608 through NAG E 609 bound to ASN E 99
20AE2SOFTWAREASN E:414 , LYS E:431binding site for Poly-Saccharide residues NAG E 601 through MAN E 603 bound to ASN E 414
21AE3SOFTWAREASN E:464 , GLN E:468 , GLN F:459binding site for Poly-Saccharide residues NAG E 604 through MAN E 607 bound to ASN E 464
22AE4SOFTWAREGLU F:95 , ASN F:99binding site for Poly-Saccharide residues NAG F 601 through NAG F 602 bound to ASN F 99
23AE5SOFTWAREASN F:414 , GLY F:430 , LYS F:431binding site for Poly-Saccharide residues NAG F 606 through MAN F 610 bound to ASN F 414
24AE6SOFTWAREGLN D:459 , ASN F:464 , GLN F:468binding site for Poly-Saccharide residues NAG F 603 through MAN F 605 bound to ASN F 464

(-) SS Bonds  (30, 30)

Asymmetric Unit
No.Residues
1A:71 -A:192
2A:331 -A:340
3A:355 -A:363
4A:387 -A:392
5A:394 -A:417
6B:71 -B:192
7B:331 -B:340
8B:355 -B:363
9B:387 -B:392
10B:394 -B:417
11C:71 -C:192
12C:331 -C:340
13C:355 -C:363
14C:387 -C:392
15C:394 -C:417
16D:71 -D:192
17D:331 -D:340
18D:355 -D:363
19D:387 -D:392
20D:394 -D:417
21E:71 -E:192
22E:331 -E:340
23E:355 -E:363
24E:387 -E:392
25E:394 -E:417
26F:71 -F:192
27F:331 -F:340
28F:355 -F:363
29F:387 -F:392
30F:394 -F:417

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5EVM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EVM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EVM)

(-) Exons   (0, 0)

(no "Exon" information available for 5EVM)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:456
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhh..eeeeeeeeeee....eeeeeeee....hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.eee.........eeeehhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee.......eeeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..........eehhhhhhhhh.hhhhhhhh......hhhhhhhh...eeeeeeee....eeeeeeee...eeeeeeeeeeeee..ee....eeee....eeeee..eeeee.hhhhee...eeee....ee..hhhhhhhhhhhhhhh.eee........eeee..eeee......eee...............eee......eeee..eeee........hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5evm A  27 ILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSDMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDDSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLD 525
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476|||   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            477||   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             513|   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              522   


Chain B from PDB  Type:PROTEIN  Length:456
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhh..eeeeeeeeeeeeeeeeeeeeeee....hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.eee.........eeeehhhhh.eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee.......eeeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..........eehhhhhhhhh.hhhhhhhh......hhhhhhhh...eeeeeeee....eeeeeeeeeeeeeeeeeeeeeeee..ee....eeee....eeeee..eeeee.hhhhee...eeee....ee..hhhhhhhhhhhhhhh.eee........eeee..eeee......eee...............eee......eeee...eee........hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5evm B  27 ILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSDMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDDSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLD 482
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476      


Chain C from PDB  Type:PROTEIN  Length:450
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhh..eeeeeeeeeeeeeeeeeeeeeee....hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.eee...eeeehhhhh.eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee.......eeeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..........eehhhhhhhhh.hhhhhhhhh.....hhhhhhhh...eeeeeeee....eeeeeeeeeeeeeeeeeeeeeeee..ee....eeee....eeeee..eeeee.hhhhee...eeee....ee..hhhhhhhhhhhhhhh.eee........eeee..eeee.hhhh.eee...............eee.......eee....ee........hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5evm C  27 ILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSDMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDDSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLD 482
                                    36        46        56        66        76        86        96       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482
                                                                                                        105|                                                                                                                                                                                                                                                                                                                                                                                  
                                                                                                         112                                                                                                                                                                                                                                                                                                                                                                                  


Chain D from PDB  Type:PROTEIN  Length:456
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhh.eeeeeeeeeee....eeeeeeee....hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.eee.........eeeehhhhh.eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee.....eeeeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..........eehhhhhhhhh.hhhhhhhh....hhhhhhhhhh...eeeeeeee....eeeeeeee...eeeeeeeeeeeee..ee....eeee....eeeee..eeeee.hhhhee...eeee....ee..hhhhhhhhhhhhhhh.eee........eeee..eeee......ee................eee......eeee..eeee........hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5evm D  27 ILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSDMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDDSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLD 482
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476      


Chain E from PDB  Type:PROTEIN  Length:456
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhh.eeeeeeeeeee....eeeeeeee....hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.eee.........eeeehhhhh.eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee.....eeeeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..........eehhhhhhhhh.hhhhhhhhh......hhhhhhh...eeeeeeee....eeeeeeee...eeeeeeeeeeeee..ee....eeee....eeeee..eeeee.hhhhee...eeee....ee..hhhhhhhhhhhhhhh.eee........eeee..eeee......eee...............eee......eeee..eeee........hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5evm E  27 ILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSDMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDDSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLD 482
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476      


Chain F from PDB  Type:PROTEIN  Length:450
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhh.eeeeeeeeeeeeeeeeeeeeeee....hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.eee...eeeehhhhh.eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eee.........eeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..........eehhhhhhhhh.hhhhhhhhh.......hhhhhh...eeeeeeee....eeeeeeeeeeeeeeeeeeeeeeee..ee....eeee....eeeee..eeeee.hhhhee...eeee....ee..hhhhhhhhhhhhhhh.eee........eeee..eeee......ee................eee.......eee..eeee........hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5evm F  27 ILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSDMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDDSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLD 482
                                    36        46        56        66        76        86        96       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482
                                                                                                        105|                                                                                                                                                                                                                                                                                                                                                                                  
                                                                                                         112
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EVM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EVM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EVM)

(-) Gene Ontology  (11, 11)

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        FUS_NIPAV | Q9IH63: 1wp7 3n27

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5EVM)