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(-) Description

Title :  STRUCTURES OF LEUKOCYTE INTEGRIN ALB2: THE AI DOMAIN, THE HEADPIECE, AND THE POCKET FOR THE INTERNAL LIGAND
 
Authors :  T. A. Springer, M. Sen
Date :  10 Oct 15  (Deposition) - 02 Mar 16  (Release) - 20 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  A (1x),B (1x),C (1x),D (1x),E (1x),F (1x)
Keywords :  Lymphocyte Function-Associated Antigen-1, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Sen, T. A. Springer
Leukocyte Integrin Alpha L Beta 2 Headpiece Structures: The Alpha I Domain, The Pocket For The Internal Ligand, And Concerted Movements Of Its Loops.
Proc. Natl. Acad. Sci. Usa V. 113 2940 2016
PubMed-ID: 26936951  |  Reference-DOI: 10.1073/PNAS.1601379113

(-) Compounds

Molecule 1 - INTEGRIN ALPHA-L
    Chains: A, C, E
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Fragment: UNP RESIDUES 26-770
    Gene: ITGAL, CD11A
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CD11 ANTIGEN-LIKE FAMILY MEMBER A,LEUKOCYTE ADHESION GLYCOPROTEIN LFA-1 ALPHA CHAIN,LFA-1A,LEUKOCYTE FUNCTION-ASSOCIATED MOLECULE 1 ALPHA CHAIN
 
Molecule 2 - INTEGRIN BETA-2
    Chains: B, D, F
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Fragment: UNP RESIDUES 23-482
    Gene: ITGB2, CD18, MFI7
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CELL SURFACE ADHESION GLYCOPROTEINS LFA-1/CR3/P150,95 SUBUNIT BETA,COMPLEMENT RECEPTOR C3 SUBUNIT BETA

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF
Biological Unit 4 (1x): A (1x)B (1x)C (1x)D (1x)E (1x)F (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 27)

Asymmetric Unit (3, 27)
No.NameCountTypeFull Name
1CA15Ligand/IonCALCIUM ION
2MG3Ligand/IonMAGNESIUM ION
3NAG9Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MG-1Ligand/IonMAGNESIUM ION
3NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (1, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MG-1Ligand/IonMAGNESIUM ION
3NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 3 (1, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MG-1Ligand/IonMAGNESIUM ION
3NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 4 (1, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MG-1Ligand/IonMAGNESIUM ION
3NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (27, 27)

Asymmetric Unit (27, 27)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:137 , SER A:139 , SER A:141 , THR A:206 , ASP A:239 , HOH A:4030 , HOH A:4046 , HOH A:4090binding site for residue MG A 2001
02AC2SOFTWAREASP A:443 , ASP A:447 , GLU A:449 , GLU A:451 , HOH A:4126 , HOH A:4218binding site for residue CA A 2002
03AC3SOFTWAREASP A:505 , ASN A:507 , ASP A:509 , LEU A:511 , ASP A:513 , HOH A:4101binding site for residue CA A 2003
04AC4SOFTWAREASP A:565 , GLU A:567 , ASP A:569 , LEU A:571 , ASP A:573 , HOH A:4134binding site for residue CA A 2004
05AC5SOFTWARESER B:116 , ASP B:119 , ASP B:120 , GLU B:325 , HOH B:4114 , HOH B:4220binding site for residue CA B 2002
06AC6SOFTWAREASP B:151 , ASN B:207 , ASP B:209 , PRO B:211binding site for residue CA B 2003
07AC7SOFTWARESER C:139 , SER C:141 , THR C:206 , ASP C:239 , HOH C:4030 , HOH C:4246 , HOH C:4262binding site for residue MG C 2001
08AC8SOFTWAREASP C:443 , ASP C:447 , GLU C:449 , GLU C:451 , HOH C:4006 , HOH C:4037binding site for residue CA C 2002
09AC9SOFTWAREASP C:505 , ASN C:507 , ASP C:509 , LEU C:511 , ASP C:513 , HOH C:4040binding site for residue CA C 2003
10AD1SOFTWAREASP C:565 , ASP C:569 , LEU C:571 , ASP C:573 , HOH C:4291binding site for residue CA C 2004
11AD2SOFTWARESER D:116 , ASP D:119 , ASP D:120 , GLU D:325 , HOH D:4176 , HOH D:4212binding site for residue CA D 2002
12AD3SOFTWAREASP D:151 , ASN D:207 , ASP D:209 , PRO D:211binding site for residue CA D 2003
13AD4SOFTWARESER E:139 , SER E:141 , ASP E:239 , HOH E:4032 , HOH E:4271 , HOH E:4325binding site for residue MG E 2001
14AD5SOFTWAREASP E:443 , ASP E:447 , GLU E:449 , GLU E:451 , HOH E:4006 , HOH E:4065binding site for residue CA E 2002
15AD6SOFTWAREASP E:505 , ASN E:507 , ASP E:509 , LEU E:511 , ASP E:513 , HOH E:4044binding site for residue CA E 2003
16AD7SOFTWAREASP E:565 , ASP E:569 , LEU E:571 , ASP E:573 , HOH E:4002binding site for residue CA E 2004
17AD8SOFTWARESER F:116 , ASP F:119 , ASP F:120 , GLU F:325 , HOH F:4071 , HOH F:4235binding site for residue CA F 2002
18AD9SOFTWAREASP F:151 , ASN F:207 , ASP F:209 , PRO F:211binding site for residue CA F 2003
19AE1SOFTWAREASN A:64 , GLN A:117binding site for Mono-Saccharide NAG A 3064 bound to ASN A 64
20AE2SOFTWAREASN B:94 , PHE B:363binding site for Mono-Saccharide NAG B 3094 bound to ASN B 94
21AE3SOFTWAREARG B:143 , ASN B:190 , HOH B:4154binding site for Mono-Saccharide NAG B 3190 bound to ASN B 190
22AE4SOFTWAREASN C:64 , LEU C:103 , GLN C:117 , ARG C:119binding site for Mono-Saccharide NAG C 3064 bound to ASN C 64
23AE5SOFTWAREASN D:94 , GLN D:390binding site for Mono-Saccharide NAG D 3094 bound to ASN D 94
24AE6SOFTWAREASN D:190binding site for Mono-Saccharide NAG D 3190 bound to ASN D 190
25AE7SOFTWAREASN E:64 , LEU E:103 , HOH E:4015 , HOH E:4152binding site for Mono-Saccharide NAG E 3064 bound to ASN E 64
26AE8SOFTWAREASN F:94 , GLN F:390 , HOH F:4141binding site for Mono-Saccharide NAG F 3094 bound to ASN F 94
27AE9SOFTWAREARG F:143 , ASN F:190binding site for Mono-Saccharide NAG F 3190 bound to ASN F 190

(-) SS Bonds  (42, 42)

Asymmetric Unit
No.Residues
1A:48 -A:55
2A:86 -A:104
3A:94 -A:125
4B:3 -B:21
5B:11 -B:425
6B:14 -B:40
7B:24 -B:51
8B:169 -B:176
9B:224 -B:264
10B:364 -B:378
11B:398 -B:423
12B:427 -B:445
13B:437 -B:448
14B:450 -B:459
15C:48 -C:55
16C:86 -C:104
17C:94 -C:125
18D:3 -D:21
19D:11 -D:425
20D:14 -D:40
21D:24 -D:51
22D:169 -D:176
23D:224 -D:264
24D:364 -D:378
25D:398 -D:423
26D:427 -D:445
27D:437 -D:448
28D:450 -D:459
29E:48 -E:55
30E:86 -E:104
31E:94 -E:125
32F:3 -F:21
33F:11 -F:425
34F:14 -F:40
35F:24 -F:51
36F:169 -F:176
37F:224 -F:264
38F:364 -F:378
39F:398 -F:423
40F:427 -F:445
41F:437 -F:448
42F:450 -F:459

(-) Cis Peptide Bonds  (12, 13)

Asymmetric Unit
No.Residues
1Lys A:280 -Pro A:281
2Glu A:368 -Pro A:369
3Ser B:77 -Pro B:78
4Leu B:155 -Pro B:156
5Lys C:280 -Pro C:281
6Glu C:368 -Pro C:369
7Ser D:77 -Pro D:78
8Leu D:155 -Pro D:156
9Lys E:280 -Pro E:281
10Glu E:368 -Pro E:369
11Ser F:77 -Pro F:78
12Leu F:155 -Pro F:156

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5E6S)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5E6S)

(-) Exons   (0, 0)

(no "Exon" information available for 5E6S)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:579
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eee...........eeeee..eeeeee........eeeee......eee...............eeee......eeeeeeeeeeee..eeeeeeeeeee.......eeee...........eeeeeeee.....hhhhhhhhhhhhhhhhhhh....eeeeeeee...eeeeehhhhhhhhhhhhhhh..........hhhhhhhhhhhhh.hhhhh.....eeeeeeee.........hhhhh..eeeeeee.hhhhhhhhhhhhhhhh..hhhhheeee.hhhhhhhhhhhhh.............eeeeeeee..eeeeee.hhhhhh.eeeee......eeeee................eeee.......eeeeee.hhhhh.eeeeee........eeeeeee...........eeee.........eeeeee..........eeeeeee....eeeeeee..............eee...........eeeee......eeeee.ee..ee.....eeeehhhhh.........eeeee........eeeeee..eeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e6s A   1 YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKILTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRP 589
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     ||320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580         
                                                                                                                                                                                                                                                                                                                                           306|                                                                                                                                                                                                                                                                                
                                                                                                                                                                                                                                                                                                                                            317                                                                                                                                                                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:455
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhh....eee..........hhhh.eehhhhhhhh..hhh.ee....eeeee.....ee..eeeeee.....eeeeeee.......eeeeeeee.hhhhhhhhhhhh.hhhhhhhhhhhhh...eeeeeee...........hhhhhhh..............eeeeeeee.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhh....eeeeeeee.......hhhhhhh..........ee..ee.hhhh....hhhhhhhhhhhh.eeeeeee...hhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhh.eeeee......eeeeeeee.....eeeee..eee........eeeeeeeee......eeeeeee.....eeeeeeee....................eee..eee.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e6s B   1 QECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRKVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC 459
                                    10        20        30        40        50        60       |74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454     
                                                                                              68|                                                                                                                                                                                                                                                                                                                                                                                                  
                                                                                               73                                                                                                                                                                                                                                                                                                                                                                                                  


Chain C from PDB  Type:PROTEIN  Length:578
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeee..eeeeee........eeeeee.....eee...............eeee......eeeeeeeeeeee..eeeeeeeeeee.......eeee...........eeeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeeeee...eeeeehhhhhhhhhhhhhhh..........hhhhhhhhhhhhh.hhhhh.....eeeeeeee.........hhhhh..eeeeeee.hhhhhhhhhhhhhhhh..hhhhheeee.hhhhhhhhhhhhhh..........eeeeeeee..eeeeee.hhhhhh.eeeee......eeeee...............eeeee.......eeeeee.hhhhh.eeeeee........eeeeeee...........eeee.........eeeeee..........eeeeeee....eeeeee..............eeee...........eeeee......eeeee.ee..ee.....eeeehhhhh.........ee...........eeeeee..eeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e6s C   1 YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV 590
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300   ||  322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582        
                                                                                                                                                                                                                                                                                                                                         304|                                                                                                                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                          317                                                                                                                                                                                                                                                                                 


Chain D from PDB  Type:PROTEIN  Length:455
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhh.....eee..........hhhh.eehhhhhhhh..hhh.ee....eeeee.....ee..eeeeee.....eeeeeee.......eeeeeeee.hhhhhhhhhhhh.hhhhhhhhhhhhh...eeeeeee...........hhhhhhh..............eeeeeeee.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhh....eeeeeeee.......hhhhhhh..........ee..ee.hhhhh...hhhhhhhhhhhh.eeeeeeee..hhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhh.eeeee......eeeeeeee.....eeeee..eee........eeeeeeeee......eeeeeee.....eeeeeeee....................eee..eee.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e6s D   1 QECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRKVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC 459
                                    10        20        30        40        50        60       |74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454     
                                                                                              68|                                                                                                                                                                                                                                                                                                                                                                                                  
                                                                                               73                                                                                                                                                                                                                                                                                                                                                                                                  


Chain E from PDB  Type:PROTEIN  Length:580
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhheee............eeee..eeeeee........eeeeee.....eee...............eeee......eeeeeeeeeeee..eeeeeeeeeee.......eeee...........eeeeeeee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeee...eeeeehhhhhhhhhhhhhhh..........hhhhhhhhhhhhh.hhhhh.....eeeeeeee.........hhhhh..eeeeeee.hhhhhhhhhhh.......hhhhheeee...hhhhhh..................eeeeeeee..eeeeee.hhhhhh..eeee......eeee.................eeee.......eeeeee.hhhhh.eeeeee........eeeeeee..........eeeee.........eeeeee..........eeeeeee....eeeeeee..............eee...........eeeee......eeeee.ee..ee.....eeeehhhhh.........eeeee........eeeeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e6s E   1 YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKILTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV 590
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     ||320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590
                                                                                                                                                                                                                                                                                                                                           306|                                                                                                                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                            317                                                                                                                                                                                                                                                                                 


Chain F from PDB  Type:PROTEIN  Length:455
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhh....eee..........hhhh.eehhhhhhhh..hhh.ee....eeeee.....ee..eeeeee.....eeeeeee.......eeeeeeee.hhhhhhhhhhhh.hhhhhhhhhhhhh..eeeeeeee...........hhhhhhh..............eeeeeeee.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhh....eeeeeeee.......hhhhhhh..........ee..ee.hhhhh...hhhhhhhhhhhh.eeeeeee...hhhhhhhhhhh....eeee......hhhhhhhhhhhhhhh.eeeee......eeeeeeee.....eeeee..eee........eeeeeeeee......eeeeeee.....eeeeeeee....................eee..eee.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e6s F   1 QECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRKVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC 459
                                    10        20        30        40        50        60       |74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454     
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(no "SCOP Domain" information available for 5E6S)

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(-) Gene Ontology  (50, 73)

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  ITB2_HUMAN | P05107
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ITAL_HUMAN | P20701: 1cqp 1dgq 1ij4 1lfa 1mjn 1mq8 1mq9 1mqa 1rd4 1t0p 1xdd 1xdg 1xuo 1zon 1zoo 1zop 2ica 2k8o 2m3e 2o7n 3bn3 3bqm 3bqn 3e2m 3eoa 3eob 3f74 3f78 3hi6 3m6f 3tcx 4ixd 5e6r 5e6u
        ITB2_HUMAN | P05107: 1jx3 1l3y 1yuk 2jf1 2p26 2p28 2v7d 3k6s 3k71 3k72 4neh 4nen 5e6r 5e6u 5e6v 5e6w 5e6x 5es4

(-) Related Entries Specified in the PDB File

5e6r 5e6u