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(-) Description

Title :  STRUCTURE OF IGE COMPLEXED WITH OMALIZUMAB
 
Authors :  L. F. Pennington, S. S. Tarchevskaya, K. Sathiyamoorthy, T. S. Jardetz
Date :  01 Feb 16  (Deposition) - 01 Jun 16  (Release) - 01 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,G,H,I,L  (1x)
Biol. Unit 2:  C,D,E,F,J,K  (1x)
Keywords :  Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. F. Pennington, S. Tarchevskaya, D. Brigger, K. Sathiyamoorthy, M. T. Graham, K. C. Nadeau, A. Eggel, T. S. Jardetzky
Structural Basis Of Omalizumab Therapy And Omalizumab-Mediated Ige Exchange.
Nat Commun V. 7 11610 2016
PubMed-ID: 27194387  |  Reference-DOI: 10.1038/NCOMMS11610

(-) Compounds

Molecule 1 - EPIDIDYMIS LUMINAL PROTEIN 214
    Chains: H, A, C, E
    Engineered: YES
    Expression System: CRICETULUS GRISEUS
    Expression System Common: CHINESE HAMSTER
    Expression System Taxid: 10029
    Gene: HEL-214
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 2 - UNCHARACTERIZED PROTEIN
    Chains: L, B, D, F
    Engineered: YES
    Expression System: CRICETULUS GRISEUS
    Expression System Common: CHINESE HAMSTER
    Expression System Taxid: 10029
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 3 - IG EPSILON CHAIN C REGION
    Chains: G, I, J, K
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Fragment: IG-LIKE 3 AND IG-LIKE 4 DOMAINS, RESIDUES 209-428
    Gene: IGHE
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): AB    GHI  L
Biological Unit 2 (1x):   CDEF   JK 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 68)

Asymmetric Unit (4, 68)
No.NameCountTypeFull Name
1BMA4Ligand/IonBETA-D-MANNOSE
2MAN8Ligand/IonALPHA-D-MANNOSE
3NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
4SO448Ligand/IonSULFATE ION
Biological Unit 1 (4, 32)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2MAN4Ligand/IonALPHA-D-MANNOSE
3NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
4SO422Ligand/IonSULFATE ION
Biological Unit 2 (4, 36)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2MAN4Ligand/IonALPHA-D-MANNOSE
3NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
4SO426Ligand/IonSULFATE ION

(-) Sites  (50, 50)

Asymmetric Unit (50, 50)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG H:72binding site for residue SO4 H 301
02AC2SOFTWARESER H:7 , GLY H:8 , GLY H:9 , THR H:115 , LYS H:209binding site for residue SO4 H 302
03AC3SOFTWAREARG H:19 , LYS H:76 , TYR H:80binding site for residue SO4 H 303
04AC4SOFTWARELYS H:76binding site for residue SO4 H 304
05AC5SOFTWARELYS L:43 , LYS L:46 , LYS L:49binding site for residue SO4 L 301
06AC6SOFTWAREARG J:427 , SER L:69 , GLY L:70binding site for residue SO4 L 302
07AC7SOFTWAREARG L:24binding site for residue SO4 L 303
08AC8SOFTWARESER B:12 , LYS B:111 , SER L:9 , SER L:10 , LYS L:107binding site for residue SO4 L 304
09AC9SOFTWARESER A:7 , GLY A:8 , GLY A:9 , THR A:115 , LYS A:209binding site for residue SO4 A 301
10AD1SOFTWAREGLY A:126binding site for residue SO4 A 302
11AD2SOFTWAREARG A:19 , LYS A:76 , TYR A:80binding site for residue SO4 A 303
12AD3SOFTWAREGLN B:41 , LYS B:43 , LYS B:46 , LYS B:49binding site for residue SO4 B 301
13AD4SOFTWARESER B:125 , ASP B:126 , GLU B:127 , HIS J:384binding site for residue SO4 B 302
14AD5SOFTWARESER B:160 , GLY B:161 , LYS L:149binding site for residue SO4 B 303
15AD6SOFTWARESER B:69 , GLY B:70 , ARG G:427binding site for residue SO4 B 304
16AD7SOFTWAREPRO C:14 , SER C:120 , SER C:121binding site for residue SO4 C 301
17AD8SOFTWAREASN C:59 , TYR C:60 , LYS C:65binding site for residue SO4 C 302
18AD9SOFTWAREASP C:216 , LYS C:217 , LYS C:218binding site for residue SO4 C 303
19AE1SOFTWARESER C:7 , GLY C:8 , GLY C:9 , THR C:115 , LYS C:209binding site for residue SO4 C 304
20AE2SOFTWARELYS D:43 , LYS D:46 , LYS D:49binding site for residue SO4 D 301
21AE3SOFTWARESER D:12 , LYS D:111 , SER F:9 , SER F:10 , LYS F:107binding site for residue SO4 D 302
22AE4SOFTWARESER D:125 , ASP D:126 , GLU D:127binding site for residue SO4 D 303
23AE5SOFTWARESER D:64binding site for residue SO4 D 304
24AE6SOFTWARESER C:140 , VAL D:119 , LYS D:211 , ARG G:408binding site for residue SO4 D 305
25AE7SOFTWARESER D:9 , SER D:10 , LYS D:107 , SER F:12 , LYS F:111binding site for residue SO4 D 306
26AE8SOFTWARETHR E:115 , LEU E:116 , PRO E:157binding site for residue SO4 E 301
27AE9SOFTWAREASP E:216 , LYS E:217 , LYS E:218binding site for residue SO4 E 302
28AF1SOFTWARELYS F:43 , LYS F:46 , LYS F:49binding site for residue SO4 F 301
29AF2SOFTWARELYS D:149 , SER F:160 , GLY F:161 , SER F:163binding site for residue SO4 F 302
30AF3SOFTWARESER F:125 , ASP F:126 , GLU F:127binding site for residue SO4 F 303
31AF4SOFTWAREGLN F:27 , SER F:28 , GLY J:368 , THR J:369binding site for residue SO4 F 304
32AF5SOFTWAREGLY G:406 , THR G:407 , ARG G:408binding site for residue SO4 G 606
33AF6SOFTWARESER G:344 , SER G:475binding site for residue SO4 G 607
34AF7SOFTWAREGLY I:406 , THR I:407 , ARG I:408binding site for residue SO4 I 606
35AF8SOFTWARETHR G:493 , GLN G:494 , ARG G:496 , GLN I:494 , ARG I:496binding site for residue SO4 I 607
36AF9SOFTWARESER I:344 , SER I:475binding site for residue SO4 I 609
37AG1SOFTWAREMET I:430 , ARG I:431 , SER I:432binding site for residue SO4 I 610
38AG2SOFTWARELYS B:187 , GLY J:406 , THR J:407 , ARG J:408binding site for residue SO4 J 606
39AG3SOFTWARESER A:123 , LYS A:125 , PRO J:486 , ASP J:487 , HOH J:701binding site for residue SO4 J 607
40AG4SOFTWARELYS B:130 , ARG J:376 , ASP J:409binding site for residue SO4 J 608
41AG5SOFTWARESER J:344 , SER J:475binding site for residue SO4 J 609
42AG6SOFTWAREGLN J:494 , THR K:493 , GLN K:494 , ARG K:496binding site for residue SO4 K 606
43AG7SOFTWAREPRO L:63 , SER L:64binding site for residue SO4 K 607
44AG8SOFTWAREGLY K:406 , THR K:407 , ARG K:408binding site for residue SO4 K 608
45AG9SOFTWAREMET K:430 , ARG K:431 , SER K:432binding site for residue SO4 K 609
46AH1SOFTWARESER D:69 , GLY D:70 , ARG K:427binding site for residue SO4 K 610
47AH2SOFTWARETYR G:339 , LEU G:359 , VAL G:361 , ASP G:362 , GLN G:392 , ASN G:394 , THR G:396 , THR G:398 , GLN G:494binding site for Poly-Saccharide residues NAG G 601 through MAN G 605 bound to ASN G 394
48AH3SOFTWAREPRO I:333 , TYR I:339 , VAL I:361 , ASP I:362 , GLN I:392 , ASN I:394 , GLN I:494binding site for Poly-Saccharide residues NAG I 601 through MAN I 605 bound to ASN I 394
49AH4SOFTWARETYR J:339 , ASP J:362 , GLN J:392 , ASN J:394binding site for Poly-Saccharide residues NAG J 601 through MAN J 605 bound to ASN J 394
50AH5SOFTWARETYR K:339 , ASP K:362 , GLN K:392 , ASN K:394 , GLN K:494binding site for Poly-Saccharide residues NAG K 601 through MAN K 605 bound to ASN K 394

(-) SS Bonds  (26, 26)

Asymmetric Unit
No.Residues
1A:22 -A:96
2A:148 -A:204
3B:23 -B:92
4B:138 -B:198
5C:22 -C:96
6C:148 -C:204
7D:23 -D:92
8D:138 -D:198
9E:22 -E:96
10E:148 -E:204
11F:23 -F:92
12F:138 -F:198
13G:335 -I:335
14G:358 -G:418
15G:464 -G:524
16H:22 -H:96
17H:148 -H:204
18I:358 -I:418
19I:464 -I:524
20J:335 -K:335
21J:358 -J:418
22J:464 -J:524
23K:358 -K:418
24K:464 -K:524
25L:23 -L:92
26L:138 -L:198

(-) Cis Peptide Bonds  (31, 31)

Asymmetric Unit
No.Residues
1Phe H:154 -Pro H:155
2Glu H:156 -Pro H:157
3Ser L:7 -Pro L:8
4Asp L:98 -Pro L:99
5Tyr L:144 -Pro L:145
6Phe A:154 -Pro A:155
7Glu A:156 -Pro A:157
8Ser B:7 -Pro B:8
9Asp B:98 -Pro B:99
10Tyr B:144 -Pro B:145
11Phe C:154 -Pro C:155
12Glu C:156 -Pro C:157
13Ser D:7 -Pro D:8
14Asp D:98 -Pro D:99
15Tyr D:144 -Pro D:145
16Phe E:154 -Pro E:155
17Glu E:156 -Pro E:157
18Ser F:7 -Pro F:8
19Asp F:98 -Pro F:99
20Tyr F:144 -Pro F:145
21Met G:470 -Pro G:471
22Ser G:532 -Pro G:533
23Leu I:425 -Pro I:426
24Met I:470 -Pro I:471
25Ser I:532 -Pro I:533
26Pro J:454 -Gly J:455
27Gly J:455 -Ser J:456
28Met J:470 -Pro J:471
29Ser J:532 -Pro J:533
30Met K:470 -Pro K:471
31Ser K:532 -Pro K:533

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HYS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HYS)

(-) Exons   (0, 0)

(no "Exon" information available for 5HYS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee........eeeeeee.....eeeeeeee....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeeeee..eeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5hys A   1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYDGSTNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSHYFGHWHFAVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 222
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220  


Chain B from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee....ee..ee.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee....hhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys B   1 DIQLTQSPSSLSASVGDRVTITCRASQSVDYDGDSYMNWYQQKPGKAPKLLIYAASYLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 217
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       


Chain C from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee........eeeeeee.....eeeeeeee....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeeeee..eeeeeee...eeeee........eeeee......ee..eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh.eeeeeeehhhheeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5hys C   1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYDGSTNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSHYFGHWHFAVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 222
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220  


Chain D from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee....ee..ee.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhh..eeeeeeeeeee....eeeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys D   1 DIQLTQSPSSLSASVGDRVTITCRASQSVDYDGDSYMNWYQQKPGKAPKLLIYAASYLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 217
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       


Chain E from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee........eeeeeee.....eeeeeeee....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeeeee..eeeeeee...eeeee........eeeee......eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys E   1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYDGSTNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSHYFGHWHFAVWGQGTLVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 222
                                    10        20        30        40        50        60        70        80        90       100       110       120       130     ||144       154       164       174       184       194       204       214        
                                                                                                                                                                 136|                                                                                 
                                                                                                                                                                  141                                                                                 


Chain F from PDB  Type:PROTEIN  Length:215
                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee....ee..ee.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys F   1 DIQLTQSPSSLSASVGDRVTITCRASQSVDYDGDSYMNWYQQKPGKAPKLLIYAASYLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 215
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     


Chain G from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee...hhhhhhh....eeeeeeeee.......eeeeee.........eeeeee.....eeeeeeee.hhhhhhhh.eeeeeee.......eeeeee.........eeeeee.........eeeeeeeeeee.....eeeeee..ee.hhh.eee...ee.....eeeeeeeeeehhhhhhh..eeeeee........eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys G 332 NPRCVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP 545
                                   341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541    


Chain H from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee........eeeeeee.....eeeeeeee....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeeeee..eeeeeee...eeeee........eeeee..hhh.ee..eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5hys H   1 EVQLVESGGGLVQPGGSLRLSCAVSGYSITSGYSWNWIRQAPGKGLEWVASITYDGSTNYNPSVKGRITISRDDSKNTFYLQMNSLRAEDTAVYYCARGSHYFGHWHFAVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 222
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220  


Chain I from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee...hhhhhhh....eeeeeeeeehhhhh..eeeeee.........eeeeee.....eeeeeeee.hhhhhhh..eeeeeee.......eeeeee.........eeeeee.........eeeeeeeeeee.....eeeeee..ee.....eee...ee.....eeeeeeeeeehhhhhhh..eeeeee........eeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys I 333 PRCVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP 545
                                   342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542   


Chain J from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee...hhhhhhh....eeeeeeeeehhhhh..eeeeee.........eeeeee.....eeeeeeee.hhhhhhh..eeeeeee.......eeeeee.........eeeeee.........eeeeeeeeeee.....eeeeee..ee.hhh.eee...ee.....eeeeeeeeeehhhhhhh..eeeeee........eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys J 332 NPRCVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP 545
                                   341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541    


Chain K from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee...hhhhhhh....eeeeeeeee.......eeeeee.........eeeeee.....eeeeeeee.hhhhhhh..eeeeeee.......eeeeee.........eeeeee.........eeeeeeeeeee.....eeeeee..ee.hhh.eee...ee.....eeeeeeeeeehhhhhhh..eeeeee........eeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys K 333 PRCVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP 545
                                   342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542   


Chain L from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee....ee..ee.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hys L   1 DIQLTQSPSSLSASVGDRVTITCRASQSVDYDGDSYMNWYQQKPGKAPKLLIYAASYLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSHEDPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 217
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
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        IGHE_HUMAN | P01854: 1f6a 1fp5 1g84 1ige 1o0v 2ige 2wqr 2y7q 3h9y 3h9z 3ha0 4ezm 4gko 4grg 4gt7 4j4p 4ki1 5anm 5lgj 5lgk

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