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(-) Description

Title :  COPM IN THE AG-BOUND FORM (BY CO-CRYSTALLIZATION)
 
Authors :  S. Zhao, X. Wang, L. Liu
Date :  18 Dec 15  (Deposition) - 07 Sep 16  (Release) - 07 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym./Biol. Unit :  A
Keywords :  Copper Binding Protein, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Zhao, X. Wang, G. Niu, W. Dong, J. Wang, Y. Fang, Y. Lin, L. Liu
Structural Basis For Copper/Silver Binding By The Synechocystis Metallochaperone Copm
Acta Crystallogr. , Sect. D V. 72 997 2016
PubMed: search  |  Reference-DOI: 10.1107/S2059798316011943

(-) Compounds

Molecule 1 - COPM
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PCOPM
    Organism Scientific: SYNECHOCYSTIS SP. PCC 6803
    Organism Taxid: 1148

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1AG3Ligand/IonSILVER ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:53 , HIS A:56 , HIS A:57 , HOH A:370binding site for residue AG A 201
2AC2SOFTWAREMET A:145 , HIS A:148 , HIS A:149 , HOH A:370binding site for residue AG A 202
3AC3SOFTWAREMET A:151 , MET A:155 , HOH A:488 , HOH A:514binding site for residue AG A 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FFD)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5FFD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FFD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FFD)

(-) Exons   (0, 0)

(no "Exon" information available for 5FFD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:137
                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ffd A  43 QWTDQSFIEMMTPHHQDAIDMAEMALQKAEHPELKKLARNIIRDQEREIKEMKTWYQQWFKRPVPAAMDLDALATAQNFDREFIRQMIPHHQMAVMMASNLKTNTERPEMDKLMDDIIRSQSAEIKQMKQWYQNWYG 195
                                    52        62        72        82        92       102     ||128       138       148       158       168       178       188       
                                                                                           108|                                                                      
                                                                                            125
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FFD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FFD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FFD)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A0A0F6QDN6_9 | A0A0F6QDN6: 5fej 5ffa 5ffb 5ffc 5ffe
        Q6YRW5_SYNY3 | Q6YRW5: 5fej 5ffa 5ffb 5ffc 5ffe

(-) Related Entries Specified in the PDB File

5fej 5ffa 5ffb 5ffc 5ffe