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(-) Description

Title :  CTX-M-15 IN COMPLEX WITH FPI-1465
 
Authors :  A. M. King, D. T. King, S. French, E. Brouillette, A. Asli, A. N. Alexande M. Vuckovic, S. N. Maiti, T. R. Parr, E. D. Brown, F. Malouin, N. C. J. Str G. D. Wright
Date :  11 Dec 15  (Deposition) - 17 Feb 16  (Release) - 27 Apr 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.01
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Hydrolase-Hydrolase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. M. King, D. T. King, S. French, E. Brouillette, A. Asli, J. A. Alexander, M. Vuckovic, S. N. Maiti, T. R. Parr, E. D. Brown, F. Malouin, N. C. Strynadka, G. D. Wright
Structural And Kinetic Characterization Of Diazabicyclooctanes As Dual Inhibitors Of Both Serine-Beta-Lactamases And Penicillin-Binding Proteins.
Acs Chem. Biol. V. 11 864 2016
PubMed-ID: 26731698  |  Reference-DOI: 10.1021/ACSCHEMBIO.5B00944

(-) Compounds

Molecule 1 - BETA-LACTAMASE
    Chains: A, B
    EC Number: 3.5.2.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BLAUOE-1, BLA, BLA CTX-M-15, BLA_1, BLA_2, BLA_3, BLACTX-M-15, BLACTX-M15, CTX-M-15, ECONIH1_02760, ECONIH1_27135, ERS085368_04262, ERS085370_01802, ERS085377_05268, ERS139214_01914, ERS139238_04648, ERS139238_04652, ERS150880_04508, HUS2011_PI0012, PCTXM15_EC8_00003, SK84_05077, SK86_03319
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
15VW2Ligand/Ion[[(3~{R},6~{S})-1-METHANOYL-6-[[(3~{S})-PYRROLIDIN-3-YL]OXYCARBAMOYL]PIPERIDIN-3-YL]AMINO] HYDROGEN SULFATE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
15VW1Ligand/Ion[[(3~{R},6~{S})-1-METHANOYL-6-[[(3~{S})-PYRROLIDIN-3-YL]OXYCARBAMOYL]PIPERIDIN-3-YL]AMINO] HYDROGEN SULFATE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
15VW1Ligand/Ion[[(3~{R},6~{S})-1-METHANOYL-6-[[(3~{S})-PYRROLIDIN-3-YL]OXYCARBAMOYL]PIPERIDIN-3-YL]AMINO] HYDROGEN SULFATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:69 , SER A:70 , ASN A:104 , TYR A:105 , SER A:130 , ASN A:132 , PRO A:167 , ASN A:170 , THR A:216 , THR A:235 , SER A:237 , LYS A:252 , ASP A:253 , ARG A:254binding site for residue 5VW A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FAO)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Glu A:166 -Pro A:167
2Glu B:166 -Pro B:167

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FAO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FAO)

(-) Exons   (0, 0)

(no "Exon" information available for 5FAO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhh.eeeeeeee....eeeee.....ee.hhhhhhhhhhhhhhhhhhh.hhhh.eeeehhhhh.....hhhhhh.eeeehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhh........eehhhhhhhhhhhhhh....hhhhhhhhhhhhhh......hhhhhh....eeeeeeeee...eeeeeeeee......eeeeeeee........hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fao A  28 ADVQQKLAELERQSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTD 286
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277         


Chain B from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh.eeeeeeee.....eeee.....ee.hhhhhhhhhhhhhhhh....hhhh.eeee..........hhhhhh.eeeehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhh........eehhhhhhhhhhhhhh....hhhhhhhhhhhhhh.......hhhhh....eeeeeeeee...eeeeeeeee......eeeeeeee........hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fao B  28 ADVQQKLAELERQSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTD 286
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FAO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FAO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FAO)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)

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  3.5.2.6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9EXV5_ECOLX | Q9EXV5: 4hbt 4hbu 5fa7 5fap

(-) Related Entries Specified in the PDB File

5fa7 5fap 5faq 5fas 5fat