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(-) Description

Title :  DROSOPHILA MELANOGASTER CYCLE W398A PAS-B WITH BOUND ETHYLENE GLYCOL
 
Authors :  C. C. Manahan, B. R. Crane
Date :  05 Dec 15  (Deposition) - 07 Dec 16  (Release) - 07 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.23
Chains :  Asym./Biol. Unit :  A
Keywords :  Pas, Ethylene Glycol, Clock, Bmal, Circadian Clock Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. C. Manahan, B. R. Crane
Drosophila Melanogaster Cycle Pas-B With Bound Ethylene Glycol
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN CYCLE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: CYC, CG8727
    Organism Common: FRUIT FLY
    Organism Scientific: DROSOPHILA MELANOGASTER
    Organism Taxid: 7227
    Synonym: BRAIN AND MUSCLE ARNT-LIKE 1,BMAL1,MOP3

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1EDO1Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:315 , PHE A:348 , TYR A:375 , PHE A:377 , SER A:389 , TRP A:391 , ALA A:407 , ASN A:409binding site for residue EDO A 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5F68)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5F68)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5F68)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5F68)

(-) Exons   (0, 0)

(no "Exon" information available for 5F68)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:103
                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeee..hhhhhhh.hhhhhh..hhhhh....hhhhhhhhhhhhhhh...ee...eeee.....eeeeeeeeeeee......eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 5f68 A 310 MFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPATSEIDYIIAKNSVF 412
                                   319       329       339       349       359       369       379       389       399       409
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5F68)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5F68)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5F68)

(-) Gene Ontology  (24, 24)

Asymmetric/Biological Unit(hide GO term definitions)

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  5f68
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CYCL_DROME | O61734: 5f5y 5f69 5f6a

(-) Related Entries Specified in the PDB File

5f5y 5f68 5f6a