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(-) Description

Title :  CURF ER CYCLOPROPANASE FROM CURACIN A BIOSYNTHETIC PATHWAY
 
Authors :  D. Khare, J. L. Smith
Date :  12 Sep 15  (Deposition) - 18 Nov 15  (Release) - 16 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  0.96
Chains :  Asym./Biol. Unit :  A
Keywords :  Polyketide Synthase, Curacin A, Cyclopropane, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Khare, W. A. Hale, A. Tripathi, L. Gu, D. H. Sherman, W. H. Gerwick, K. Hakansson, J. L. Smith
Structural Basis For Cyclopropanation By A Unique Enoyl-Acy Carrier Protein Reductase.
Structure V. 23 2213 2015
PubMed-ID: 26526850  |  Reference-DOI: 10.1016/J.STR.2015.09.013

(-) Compounds

Molecule 1 - CURF
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 273-611
    Gene: CURF
    Organism Scientific: LYNGBYA MAJUSCULA
    Organism Taxid: 158786

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:45 , THR A:140 , SER A:163 , GLY A:164 , GLY A:165 , ALA A:166 , THR A:185 , SER A:186 , LYS A:189 , SER A:204 , ARG A:205 , SER A:228 , LEU A:229 , HIS A:231 , ILE A:251 , PHE A:274 , ASP A:275 , MET A:276 , SER A:326 , HIS A:328 , HOH A:501 , HOH A:504 , HOH A:515 , HOH A:541 , HOH A:576 , HOH A:578 , HOH A:593 , HOH A:606 , HOH A:607 , HOH A:609 , HOH A:750 , HOH A:780 , HOH A:825 , HOH A:833 , HOH A:949binding site for residue NAP A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5DP2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5DP2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5DP2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5DP2)

(-) Exons   (0, 0)

(no "Exon" information available for 5DP2)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:335
                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.....hhhhheeee..........eeeeeeeeeehhhhhhhhh......hhhhhhhhh.hhhhh....eeeeeeeee...........eeeee........eeeehhh.eee.....hhhhhh.hhhhhhhhhhhhh.........eeee....hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhh...eeee....hhhhhhhhhh....eeeeee.....hhhhhhhhheeeeeeeee.......hhhhhhhhh...eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhh.....eeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5dp2 A   3 PQPVQLRIPSYGLLKNLTWMPQERRKPKSTEVEVQIKAVPVNFREVLNVLGIFQEYIKKRYRSGIISAENLTFGVEGVGTVVAVGSDVSQWKVGDEVILAYPGNAFSSFVICSPDDLLAKPSDLSMVEAATIFMSFFTAYYGLHNLAKVQPGERVLIHAASGGAGQAAVQLAQFFGSEVFATTSPHKISVLREQGIKHVMNSRTTEFASEVRELTQGNGVDVIFNSLTHGEYIPKNIDILAPGGRYIEIGRLNIWSHEQVSQRRPDVKYFPFDMSDEFVRDKQFHAKLWDDLALLFESGSLKPLPYKVFPSEDVVEAFRHLQHSKHIGKIVVTMP 337
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5DP2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5DP2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5DP2)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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        Q6DNE7_9CYAN | Q6DNE7: 2q2x 2q34 2q35 3kg6

(-) Related Entries Specified in the PDB File

5dov 5doz 5dp1